RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 FBXL5Q9UKA1 691 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 COG5Q9UP83 839 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 STYXL1Q9Y6J8 313 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 RBM47A0AV96 593 aaKnown RBP5.45□□□□□ -1.54
ATXN3-202ENST00000359366 MANSC4A6NHS7 340 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-202ENST00000359366 UNCXA6NJT0 531 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 H0YCG3 227 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 N4BP1O75113 896 aaKnown RBP5.45□□□□□ -1.54
ATXN3-202ENST00000359366 GJB6O95452 261 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 FTLP02792 175 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-202ENST00000359366 NFICP08651 508 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 KRT19P08727 400 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 H2AFZP0C0S5 128 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 WEE2P0C1S8 567 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 SMIM10L2AP0DMW4 78 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 SMIM10L2BP0DMW5 78 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 ARF4P18085 180 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-202ENST00000359366 MFAP3P55082 362 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 PTENP60484 403 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 SNRPFP62306 86 aaKnown RBP5.45□□□□□ -1.54
ATXN3-202ENST00000359366 NCOA4Q13772 614 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 KIF22Q14807 665 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 TTC31Q49AM3 519 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-202ENST00000359366 MAP9Q49MG5 647 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 PAPD7Q5XG87 772 aaKnown RBP5.45□□□□□ -1.54
ATXN3-202ENST00000359366 TMEM270Q6UE05 265 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 C15orf39Q6ZRI6 1047 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 H2AFVQ71UI9 128 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 ADAT2Q7Z6V5 191 aaKnown RBP5.45□□□□□ -1.54
ATXN3-202ENST00000359366 CREG2Q8IUH2 290 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 FAM71AQ8IYT1 594 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 TRIM58Q8NG06 486 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 SLC35G2Q8TBE7 412 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 HDAC7Q8WUI4 952 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 CPA5Q8WXQ8 436 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 SHC3Q92529 594 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 GOLGA1Q92805 767 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 GDAP1L1Q96MZ0 367 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 ALS2CR12Q96Q35 445 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 OSMRQ99650 979 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 APOL6Q9BWW8 343 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 PARD6BQ9BYG5 372 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 TRIM7Q9C029 511 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 TMEM134Q9H6X4 195 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 ANKZF1Q9H8Y5 726 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 C1orf112Q9NSG2 853 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 NOCTQ9UK39 431 aaKnown RBP5.45□□□□□ -1.54
ATXN3-202ENST00000359366 GJD2Q9UKL4 321 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 NENFQ9UMX5 172 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 SNX12Q9UMY4 172 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 POLIQ9UNA4 740 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 ANK1P16157 1881 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 PASKQ96RG2 1323 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 CTAGE15A4D2H0 777 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 GOLGA6CA6NDK9 693 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 GOLGA6BA6NDN3 693 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 EFCAB8A8MWE9 144 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 LACTBL1A8MY62 500 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 MYO1CO00159 1063 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 ACKR2O00590 384 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 MAPK13O15264 365 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 OGTO15294 1046 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 TREHO43280 583 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 PIGRP01833 764 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 C6orf222P0C671 652 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-202ENST00000359366 GOLGA6DP0CG33 693 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 CTAGE8P0CG41 777 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 ELNP15502 786 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 CYP11B1P15538 503 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 ABCD1P33897 745 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 PSMC4P43686 418 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 EFNA5P52803 228 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 NOP14P78316 857 aaKnown RBP5.45□□□□□ -1.54
ATXN3-202ENST00000359366 SLC7A5Q01650 507 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 FMO1Q01740 532 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 BMS1Q14692 1282 aaKnown RBP5.45□□□□□ -1.54
ATXN3-202ENST00000359366 PDCD2Q16342 344 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-202ENST00000359366 AMHR2Q16671 573 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 ZNF484Q5JVG2 852 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 SLFN12LQ6IEE8 588 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 AADACL2Q6P093 401 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 ZNF662Q6ZS27 426 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 DAAM2Q86T65 1068 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 CTAGE6Q86UF2 777 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 VPS36Q86VN1 386 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 CTAGE4Q8IX94 777 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 TMEM174Q8WUU8 243 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 DNAJB3Q8WWF6 145 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 CGRRF1Q99675 332 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 FZD8Q9H461 694 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 PDZD7Q9H5P4 517 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 ETAA1Q9NY74 926 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 GOLGA6AQ9NYA3 693 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 NXF1Q9UBU9 619 aaKnown RBP5.45□□□□□ -1.54
ATXN3-202ENST00000359366 GNEQ9Y223 722 aaKnown RBP5.45□□□□□ -1.54
ATXN3-202ENST00000359366 COQ4Q9Y3A0 265 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 PCDHB4Q9Y5E5 795 aa5.45□□□□□ -1.54
ATXN3-202ENST00000359366 BZW2Q9Y6E2 419 aaKnown RBP5.45□□□□□ -1.54
ATXN3-202ENST00000359366 KCNK3O14649 394 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 P4HA2O15460 535 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms