RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 SQORQ9Y6N5 450 aa14.48□□□□□ -0.09
CCDC197-201ENST00000359253 FRMPD3Q5JV73 1810 aa14.48□□□□□ -0.09
CCDC197-201ENST00000359253 ANKRD62A6NC57 917 aa14.47□□□□□ -0.09
CCDC197-201ENST00000359253 XPOTO43592 962 aaKnown RBP14.47□□□□□ -0.09
CCDC197-201ENST00000359253 RTN2O75298 545 aa14.47□□□□□ -0.09
CCDC197-201ENST00000359253 CXCL8P10145 99 aa14.47□□□□□ -0.09
CCDC197-201ENST00000359253 CYP11B1P15538 503 aa14.47□□□□□ -0.09
CCDC197-201ENST00000359253 USP8P40818 1118 aa14.47□□□□□ -0.09
CCDC197-201ENST00000359253 CDR2Q01850 454 aa14.47□□□□□ -0.09
CCDC197-201ENST00000359253 HIC1Q14526 733 aa14.47□□□□□ -0.09
CCDC197-201ENST00000359253 LRRC26Q2I0M4 334 aa14.47□□□□□ -0.09
CCDC197-201ENST00000359253 SLC10A6Q3KNW5 377 aa14.47□□□□□ -0.09
CCDC197-201ENST00000359253 LMBRD2Q68DH5 695 aaPredicted RBP14.47□□□□□ -0.09
CCDC197-201ENST00000359253 TRIM72Q6ZMU5 477 aa14.47□□□□□ -0.09
CCDC197-201ENST00000359253 EPS8L1Q8TE68 723 aa14.47□□□□□ -0.09
CCDC197-201ENST00000359253 PPP1R16BQ96T49 567 aa14.47□□□□□ -0.09
CCDC197-201ENST00000359253 TRIM6Q9C030 488 aaPredicted RBP14.47□□□□□ -0.09
CCDC197-201ENST00000359253 NIF3L1Q9GZT8 377 aa14.47□□□□□ -0.09
CCDC197-201ENST00000359253 ISCUQ9H1K1 167 aa14.47□□□□□ -0.09
CCDC197-201ENST00000359253 CDC23Q9UJX2 597 aa14.47□□□□□ -0.09
CCDC197-201ENST00000359253 GRIN2DO15399 1336 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 A0A0U1RQJ8 604 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 TLR3O15455 904 aaKnown RBP14.46□□□□□ -0.09
CCDC197-201ENST00000359253 CYP26A1O43174 497 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 CSDE1O75534 798 aaKnown RBP14.46□□□□□ -0.09
CCDC197-201ENST00000359253 CST3P01034 146 aaPredicted RBP14.46□□□□□ -0.09
CCDC197-201ENST00000359253 ATN1P54259 1190 aaPredicted RBP14.46□□□□□ -0.09
CCDC197-201ENST00000359253 OSTNP61366 133 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 RBP5P82980 135 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 TMEM62Q0P6H9 643 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 PTK7Q13308 1070 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 TMEM132DQ14C87 1099 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 ZNF699Q32M78 642 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 PAPD7Q5XG87 772 aaKnown RBP14.46□□□□□ -0.09
CCDC197-201ENST00000359253 GLYCTKQ8IVS8 523 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 RHOT2Q8IXI1 618 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 EFCAB13Q8IY85 973 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 HACE1Q8IYU2 909 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 CEP120Q8N960 986 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 USP38Q8NB14 1042 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 LNX1Q8TBB1 728 aaPredicted RBP14.46□□□□□ -0.09
CCDC197-201ENST00000359253 ATRIPQ8WXE1 791 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 CTNNBL1Q8WYA6 563 aaPredicted RBP14.46□□□□□ -0.09
CCDC197-201ENST00000359253 KAT5Q92993 513 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 PI4K2AQ9BTU6 479 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 CYP3A43Q9HB55 503 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 NOCTQ9UK39 431 aaKnown RBP14.46□□□□□ -0.09
CCDC197-201ENST00000359253 GINS2Q9Y248 185 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 PCDHGC5Q9Y5F6 944 aa14.46□□□□□ -0.09
CCDC197-201ENST00000359253 MACROD2A1Z1Q3 448 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 DYNC1I1O14576 645 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 GPR182O15218 404 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 CTIFO43310 598 aaKnown RBP14.45□□□□□ -0.1
CCDC197-201ENST00000359253 NPTXRO95502 500 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 ABL1P00519 1130 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 PNMA6AP0CW24 399 aaPredicted RBP14.45□□□□□ -0.1
CCDC197-201ENST00000359253 KRT5P13647 590 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 ACO1P21399 889 aaKnown RBP14.45□□□□□ -0.1
CCDC197-201ENST00000359253 HADHBP55084 474 aaKnown RBP14.45□□□□□ -0.1
CCDC197-201ENST00000359253 MYL6P60660 151 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 ZNF200P98182 395 aaPredicted RBP14.45□□□□□ -0.1
CCDC197-201ENST00000359253 TLE2Q04725 743 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 WHAMMP3Q1A5X7 153 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 ZNF667Q5HYK9 610 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 JADE1Q6IE81 842 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 GDF6Q6KF10 455 aaPredicted RBP14.45□□□□□ -0.1
CCDC197-201ENST00000359253 CDR2LQ86X02 465 aaPredicted RBP14.45□□□□□ -0.1
CCDC197-201ENST00000359253 RPUSD2Q8IZ73 545 aaKnown RBP14.45□□□□□ -0.1
CCDC197-201ENST00000359253 SYCE1Q8N0S2 351 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 CEP112Q8N8E3 955 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 TRIM11Q96F44 468 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 CDHR5Q9HBB8 845 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 APOBEC3GQ9HC16 384 aaKnown RBP14.45□□□□□ -0.1
CCDC197-201ENST00000359253 TRIM10Q9UDY6 481 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 PIN4Q9Y237 131 aaKnown RBP14.45□□□□□ -0.1
CCDC197-201ENST00000359253 NUB1Q9Y5A7 615 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 PCDHB4Q9Y5E5 795 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 MRFAP1Q9Y605 127 aa14.45□□□□□ -0.1
CCDC197-201ENST00000359253 MKI67P46013 3256 aaKnown RBP14.45□□□□□ -0.1
CCDC197-201ENST00000359253 UQCRHLA0A096LP55 91 aa14.44□□□□□ -0.1
CCDC197-201ENST00000359253 RPS6KA5O75582 802 aa14.44□□□□□ -0.1
CCDC197-201ENST00000359253 CD4P01730 458 aa14.44□□□□□ -0.1
CCDC197-201ENST00000359253 UQCRHP07919 91 aa14.44□□□□□ -0.1
CCDC197-201ENST00000359253 TCP1P17987 556 aaKnown RBP14.44□□□□□ -0.1
CCDC197-201ENST00000359253 CYP3A5P20815 502 aa14.44□□□□□ -0.1
CCDC197-201ENST00000359253 GALCP54803 685 aa14.44□□□□□ -0.1
CCDC197-201ENST00000359253 NAP1L1P55209 391 aaKnown RBP14.44□□□□□ -0.1
CCDC197-201ENST00000359253 PTGISQ16647 500 aa14.44□□□□□ -0.1
CCDC197-201ENST00000359253 TRIM60Q495X7 471 aa14.44□□□□□ -0.1
CCDC197-201ENST00000359253 XKR4Q5GH76 650 aa14.44□□□□□ -0.1
CCDC197-201ENST00000359253 FAM47CQ5HY64 1035 aa14.44□□□□□ -0.1
CCDC197-201ENST00000359253 FAM26DQ5JW98 314 aa14.44□□□□□ -0.1
CCDC197-201ENST00000359253 ALKAL1Q6UXT8 129 aa14.44□□□□□ -0.1
CCDC197-201ENST00000359253 NOP9Q86U38 636 aaKnown RBP14.44□□□□□ -0.1
CCDC197-201ENST00000359253 SLC47A2Q86VL8 602 aa14.44□□□□□ -0.1
CCDC197-201ENST00000359253 FAM126BQ8IXS8 530 aa14.44□□□□□ -0.1
CCDC197-201ENST00000359253 UBR7Q8N806 425 aa14.44□□□□□ -0.1
CCDC197-201ENST00000359253 BEST2Q8NFU1 509 aa14.44□□□□□ -0.1
CCDC197-201ENST00000359253 OLIG1Q8TAK6 271 aa14.44□□□□□ -0.1
CCDC197-201ENST00000359253 RFFLQ8WZ73 363 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms