RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 WDR12Q9GZL7 423 aaKnown RBP6.89□□□□□ -1.31
VPS13B-202ENST00000357162 MANSC1Q9H8J5 431 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 LMTK2Q8IWU2 1503 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 TIMM44O43615 452 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 SNAP91O60641 907 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 TYK2P29597 1187 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 ZAP70P43403 619 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 USP13Q92995 863 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-202ENST00000357162 PLIN2Q99541 437 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 SF3B1O75533 1304 aaKnown RBP eCLIP6.89□□□□□ -1.316e-6■■■■■ 94.1
VPS13B-202ENST00000357162 SPEF2Q9C093 1822 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 ASNA1O43681 348 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 HSD17B3P37058 310 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 GEMIN4P57678 1058 aaKnown RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 DNAJC3Q13217 504 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 FOXP4Q8IVH2 680 aaPredicted RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 SCUBE1Q8IWY4 988 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 CCNB1IP1Q9NPC3 277 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 RGL2O15211 777 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 ADSLP30566 484 aaPredicted RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 PRCPP42785 496 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 METTL16Q86W50 562 aaKnown RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 BBS7Q8IWZ6 715 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 SVOPQ8N4V2 548 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 MIEF2Q96C03 454 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 KRCC1Q9NPI7 259 aaPredicted RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 DDX28Q9NUL7 540 aaKnown RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 LRRC10BA6NIK2 292 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 LSM1O15116 133 aaKnown RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 BBOX1O75936 387 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 TMEM253P0C7T8 217 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 RBM20Q5T481 1227 aaKnown RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 ARHGEF16Q5VV41 709 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 CCDC33Q8N5R6 958 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 TMEM245Q9H330 911 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 GPCPD1Q9NPB8 672 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 TAGLN3Q9UI15 199 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 CLUHO75153 1309 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 MAGEB2O15479 319 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 PTPN12Q05209 780 aaKnown RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 DRAP1Q14919 205 aaPredicted RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 USHBP1Q8N6Y0 703 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 STK32AQ8WU08 396 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 DDX50Q9BQ39 737 aaKnown RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 C21orf2O43822 256 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 ZNF12P17014 697 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 RPL26P61254 145 aaKnown RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 PTK6Q13882 451 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 CCDC144BQ3MJ40 725 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 ULK2Q8IYT8 1036 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 CALN1Q9BXU9 219 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 PCDHGB4Q9UN71 923 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 FAM58BPP0C7Q3 252 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 XRCC4Q13426 336 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 TAF2Q6P1X5 1199 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 G2E3Q7L622 706 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 ARCQ7LC44 396 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 ADA2Q9NZK5 511 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 HPS5Q9UPZ3 1129 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 TGFBR2P37173 567 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 C1DQ13901 141 aaKnown RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 TMEM154Q6P9G4 183 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 AENQ8WTP8 325 aaKnown RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 C6orf203Q9P0P8 240 aaPredicted RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 ANKRD6Q9Y2G4 727 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 TRIM66O15016 1216 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 PJA2O43164 708 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 COASYQ13057 564 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 ZNF667Q5HYK9 610 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 TRAPPC3LQ5T215 181 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 ATP8B4Q8TF62 1192 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 OSBPL10Q9BXB5 764 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 FAM124BQ9H5Z6 455 aaPredicted RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 MAGEB16A2A368 324 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 H0YC42 278 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 MAFGO15525 162 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 IL12AP29459 219 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 HSD17B4P51659 736 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.88□□□□□ -1.312e-7■■■■■ 102.3
VPS13B-202ENST00000357162 ZBED8Q8IZ13 594 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 TBCKQ8TEA7 893 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 OSCP1Q8WVF1 389 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 PCDHB8Q9UN66 801 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 USP31Q70CQ4 1352 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 ABHD2P08910 425 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 SERPINH1P50454 418 aaKnown RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 CAMK1DQ8IU85 385 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 FAM212AQ96EL1 285 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 C9orf16Q9BUW7 83 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 ANO3Q9BYT9 981 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 AARS2Q5JTZ9 985 aaKnown RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 RGS9BPQ6ZS82 235 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 ZNF589Q86UQ0 364 aaPredicted RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 PHF21AQ96BD5 680 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 SENP7Q9BQF6 1050 aa6.88□□□□□ -1.31
VPS13B-202ENST00000357162 UBE2OQ9C0C9 1292 aaKnown RBP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.88□□□□□ -1.31
VPS13B-202ENST00000357162 POLBP06746 335 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 CCDC153Q494R4 210 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 ZNF513Q8N8E2 541 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms