RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ZFP42Q96MM3 310 aa19.51■□□□□ 0.71
SMARCD3-202ENST00000356800 HIPK3Q9H422 1215 aa19.51■□□□□ 0.71
SMARCD3-202ENST00000356800 ITGA11Q9UKX5 1188 aa19.51■□□□□ 0.71
SMARCD3-202ENST00000356800 ATP11BQ9Y2G3 1177 aa19.51■□□□□ 0.71
SMARCD3-202ENST00000356800 PTGESO14684 152 aa19.5■□□□□ 0.71
SMARCD3-202ENST00000356800 KRT19P08727 400 aa19.5■□□□□ 0.71
SMARCD3-202ENST00000356800 RAB27AP51159 221 aa19.5■□□□□ 0.71
SMARCD3-202ENST00000356800 KLHL30Q0D2K2 578 aa19.5■□□□□ 0.71
SMARCD3-202ENST00000356800 LRRC26Q2I0M4 334 aa19.5■□□□□ 0.71
SMARCD3-202ENST00000356800 ASTE1Q2TB18 679 aaPredicted RBP19.5■□□□□ 0.71
SMARCD3-202ENST00000356800 FAM71AQ8IYT1 594 aa19.5■□□□□ 0.71
SMARCD3-202ENST00000356800 GSTCDQ8NEC7 633 aa19.5■□□□□ 0.71
SMARCD3-202ENST00000356800 TMEM106CQ9BVX2 250 aa19.5■□□□□ 0.71
SMARCD3-202ENST00000356800 WNT8AQ9H1J5 351 aa19.5■□□□□ 0.71
SMARCD3-202ENST00000356800 RGS18Q9NS28 235 aa19.5■□□□□ 0.71
SMARCD3-202ENST00000356800 TBX21Q9UL17 535 aa19.5■□□□□ 0.71
SMARCD3-202ENST00000356800 EIF3CLB5ME19 914 aaKnown RBP19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 FERP16591 822 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 POLR2BP30876 1174 aaKnown RBP19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 AFF1P51825 1210 aaKnown RBP19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 CUL2Q13617 745 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 PTPN14Q15678 1187 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 ZNF699Q32M78 642 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 ENOSF1Q7L5Y1 443 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 EIF3CQ99613 913 aaKnown RBP19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 IMPG2Q9BZV3 1241 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 HAUS4Q9H6D7 363 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 AGAP1Q9UPQ3 857 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 REXO2Q9Y3B8 237 aaKnown RBP19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 BZW2Q9Y6E2 419 aaKnown RBP19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 MKI67P46013 3256 aaKnown RBP19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 C9IYK1 514 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 OFD1O75665 1012 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 TUBB4AP04350 444 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 ACO1P21399 889 aaKnown RBP19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 CYP2C18P33260 490 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 KRT83P78385 493 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 PTK2Q05397 1052 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 SOX4Q06945 474 aaPredicted RBP19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 TCTN1Q2MV58 587 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 TDRD12Q587J7 1177 aaKnown RBP19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 PLEKHG4Q58EX7 1191 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 ZNF571Q7Z3V5 609 aaPredicted RBP19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 ZNF598Q86UK7 904 aaKnown RBP19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 ECHDC2Q86YB7 292 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 HACE1Q8IYU2 909 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 ACRBPQ8NEB7 543 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 OLIG1Q8TAK6 271 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 SCLYQ96I15 445 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 C16orf45Q96MC5 204 aaPredicted RBP19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 PPP1R10Q96QC0 940 aaKnown RBP19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 TSPAN18Q96SJ8 248 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 GAD1Q99259 594 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 PPP1R12CQ9BZL4 782 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 UBQLN1Q9UMX0 589 aaKnown RBP19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 GIT1Q9Y2X7 761 aa19.49■□□□□ 0.71
SMARCD3-202ENST00000356800 TDRD15B5MCY1 1934 aaKnown RBP19.48■□□□□ 0.71
SMARCD3-202ENST00000356800 KIF2AO00139 706 aaPredicted RBP19.48■□□□□ 0.71
SMARCD3-202ENST00000356800 PPEF2O14830 753 aa19.48■□□□□ 0.71
SMARCD3-202ENST00000356800 ZNF263O14978 683 aa19.48■□□□□ 0.71
SMARCD3-202ENST00000356800 LCA5LO95447 670 aa19.48■□□□□ 0.71
SMARCD3-202ENST00000356800 MLH1P40692 756 aa19.48■□□□□ 0.71
SMARCD3-202ENST00000356800 CCL23P55773 120 aa19.48■□□□□ 0.71
SMARCD3-202ENST00000356800 RBP5P82980 135 aa19.48■□□□□ 0.71
SMARCD3-202ENST00000356800 UBR7Q8N806 425 aa19.48■□□□□ 0.71
SMARCD3-202ENST00000356800 DBF4BQ8NFT6 615 aa19.48■□□□□ 0.71
SMARCD3-202ENST00000356800 BEST2Q8NFU1 509 aa19.48■□□□□ 0.71
SMARCD3-202ENST00000356800 TAF4BQ92750 862 aa19.48■□□□□ 0.71
SMARCD3-202ENST00000356800 FAM81BQ96LP2 452 aa19.48■□□□□ 0.71
SMARCD3-202ENST00000356800 NIF3L1Q9GZT8 377 aa19.48■□□□□ 0.71
SMARCD3-202ENST00000356800 TSPYL2Q9H2G4 693 aaPredicted RBP19.48■□□□□ 0.71
SMARCD3-202ENST00000356800 MIOSQ9NXC5 875 aa19.48■□□□□ 0.71
SMARCD3-202ENST00000356800 POLIQ9UNA4 740 aa19.48■□□□□ 0.71
SMARCD3-202ENST00000356800 ARL5CA6NH57 179 aa19.47■□□□□ 0.71
SMARCD3-202ENST00000356800 IPO7O95373 1038 aaKnown RBP19.47■□□□□ 0.71
SMARCD3-202ENST00000356800 TBXAS1P24557 533 aaPredicted RBP19.47■□□□□ 0.71
SMARCD3-202ENST00000356800 ANXA13P27216 316 aa19.47■□□□□ 0.71
SMARCD3-202ENST00000356800 ATICP31939 592 aa19.47■□□□□ 0.71
SMARCD3-202ENST00000356800 USP8P40818 1118 aa19.47■□□□□ 0.71
SMARCD3-202ENST00000356800 ASPAP45381 313 aa19.47■□□□□ 0.71
SMARCD3-202ENST00000356800 KIF11P52732 1056 aa19.47■□□□□ 0.71
SMARCD3-202ENST00000356800 NECAB2Q7Z6G3 386 aa19.47■□□□□ 0.71
SMARCD3-202ENST00000356800 RNF169Q8NCN4 708 aa19.47■□□□□ 0.71
SMARCD3-202ENST00000356800 HPDLQ96IR7 371 aa19.47■□□□□ 0.71
SMARCD3-202ENST00000356800 SYT11Q9BT88 431 aa19.47■□□□□ 0.71
SMARCD3-202ENST00000356800 VRTNQ9H8Y1 702 aa19.47■□□□□ 0.71
SMARCD3-202ENST00000356800 A0A0U1RQJ8 604 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 ANO9A1A5B4 782 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 CYP26A1O43174 497 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 CLSTN1O94985 981 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 SKIP12755 728 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 IBSPP21815 317 aaPredicted RBP19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 FAM189BP81408 668 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 NAB2Q15742 525 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 C9orf57Q5W0N0 161 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 ZNF662Q6ZS27 426 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 SLC24A5Q71RS6 500 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 ATRIPQ8WXE1 791 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 JAKMIP2Q96AA8 810 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms