RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 RPF1Q9H9Y2 349 aaKnown RBP4.32□□□□□ -1.72
CNOT4-202ENST00000356162 PLEKHA5Q9HAU0 1116 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 SLC38A7Q9NVC3 462 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 PGPEP1Q9NXJ5 209 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 SPG21Q9NZD8 308 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 AGO2Q9UKV8 859 aaKnown RBP4.32□□□□□ -1.72
CNOT4-202ENST00000356162 GDAQ9Y2T3 454 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 DERAQ9Y315 318 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 FSD2A1L4K1 749 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 SOBPA7XYQ1 873 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 ANKRD63C9JTQ0 380 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 GOLGA6L22H0YM25 854 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 TMEM189-UBE2V1I3L0A0 370 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 FSCN2O14926 492 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 XPOTO43592 962 aaKnown RBP4.32□□□□□ -1.72
CNOT4-202ENST00000356162 LPXNO60711 386 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 ZC3H11AO75152 810 aaKnown RBP eCLIP4.32□□□□□ -1.72
CNOT4-202ENST00000356162 GADD45BO75293 160 aaPredicted RBP4.32□□□□□ -1.72
CNOT4-202ENST00000356162 FGF18O76093 207 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 IL18RAPO95256 599 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 LDHAP00338 332 aaKnown RBP4.32□□□□□ -1.72
CNOT4-202ENST00000356162 POMCP01189 267 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 ITGB1P05556 798 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 THP07101 528 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 ADRB2P07550 413 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 CXCL8P10145 99 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 BMP2P12643 396 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 NFIL3Q16649 462 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 PDE12Q6L8Q7 609 aaKnown RBP4.32□□□□□ -1.72
CNOT4-202ENST00000356162 ARMCX5Q6P1M9 558 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 ALKAL1Q6UXT8 129 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 HS2ST1Q7LGA3 356 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 BRSK2Q8IWQ3 736 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 CEP120Q8N960 986 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 KLHL23Q8NBE8 558 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 KIAA0895Q8NCT3 520 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 SCFD1Q8WVM8 642 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 POMGNT1Q8WZA1 660 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 SMARCE1Q969G3 411 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 FAM161BQ96MY7 647 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 PPP1R10Q96QC0 940 aaKnown RBP4.32□□□□□ -1.72
CNOT4-202ENST00000356162 GBP3Q9H0R5 595 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 CERS4Q9HA82 394 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 SLC39A2Q9NP94 309 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 KLK14Q9P0G3 267 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 CPSF3Q9UKF6 684 aaKnown RBP4.32□□□□□ -1.72
CNOT4-202ENST00000356162 MTUS1Q9ULD2 1270 aa4.32□□□□□ -1.72
CNOT4-202ENST00000356162 TTC26A0AVF1 554 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 H3BM21 787 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 GRM6O15303 877 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 EXTL3O43909 919 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 B4GALT3O60512 393 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 DDHD2O94830 711 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 GALTP07902 379 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 CYP3A5P20815 502 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 HOXD13P35453 343 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 PPP1R2P41236 205 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 CBLBQ13191 982 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 PNOCQ13519 176 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 ADGRE1Q14246 886 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 NAB2Q15742 525 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 ENOX2Q16206 610 aaKnown RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 DDX53Q86TM3 631 aaKnown RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 NT5DC4Q86YG4 428 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 ZNF280BQ86YH2 543 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 GPD1LQ8N335 351 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 GUF1Q8N442 669 aaKnown RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 GLIS3Q8NEA6 775 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 GSTCDQ8NEC7 633 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 SPATA20Q8TB22 786 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 SPPL3Q8TCT6 385 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 TMEM174Q8WUU8 243 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 HPS3Q969F9 1004 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 TMEM169Q96HH4 297 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 IGSF21Q96ID5 467 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 GSDMAQ96QA5 445 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 COLEC11Q9BWP8 271 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 ZBP1Q9H171 429 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 NSUN3Q9H649 340 aaKnown RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 KIAA1586Q9HCI6 787 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 AGPAT3Q9NRZ7 376 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 MARCH5Q9NX47 278 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 MIOSQ9NXC5 875 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 UBQLN1Q9UMX0 589 aaKnown RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 PLAGL2Q9UPG8 496 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 FAN1Q9Y2M0 1017 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 MTCH2Q9Y6C9 303 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 SMIM28A0A1B0GU29 152 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 ESPNB1AK53 854 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 TISP43B9A030 160 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 RFXAPO00287 272 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 NRP1O14786 923 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 MEFVO15553 781 aaPredicted RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 CALUO43852 315 aaPredicted RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 PRPF40AO75400 957 aaKnown RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 PAX3P23760 479 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 ADSSP30520 456 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 LRPAP1P30533 357 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 TNFSF9P41273 254 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 OR1G1P47890 313 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms