RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 UBR7Q8N806 425 aa27.49■■□□□ 1.99
CLK2-201ENST00000355560 TRPV1Q8NER1 839 aa27.49■■□□□ 1.99
CLK2-201ENST00000355560 GTF3C4Q9UKN8 822 aa27.49■■□□□ 1.99
CLK2-201ENST00000355560 CCDC151A5D8V7 595 aa27.48■■□□□ 1.99
CLK2-201ENST00000355560 RRP9O43818 475 aaKnown RBP27.48■■□□□ 1.99
CLK2-201ENST00000355560 HES6Q96HZ4 224 aa27.48■■□□□ 1.99
CLK2-201ENST00000355560 CALR3Q96L12 384 aaKnown RBP27.48■■□□□ 1.99
CLK2-201ENST00000355560 ASB7Q9H672 318 aa27.48■■□□□ 1.99
CLK2-201ENST00000355560 CDHR5Q9HBB8 845 aa27.48■■□□□ 1.99
CLK2-201ENST00000355560 TRIP12Q14669 1992 aaPredicted RBP27.48■■□□□ 1.99
CLK2-201ENST00000355560 CD58P19256 250 aa27.47■■□□□ 1.99
CLK2-201ENST00000355560 LACTBP83111 547 aaPredicted RBP27.47■■□□□ 1.99
CLK2-201ENST00000355560 SLC10A6Q3KNW5 377 aa27.47■■□□□ 1.99
CLK2-201ENST00000355560 C1orf127Q8N9H9 656 aa27.47■■□□□ 1.99
CLK2-201ENST00000355560 DNAJB3Q8WWF6 145 aa27.47■■□□□ 1.99
CLK2-201ENST00000355560 TRIB2Q92519 343 aa27.47■■□□□ 1.99
CLK2-201ENST00000355560 GABRQQ9UN88 632 aa27.47■■□□□ 1.99
CLK2-201ENST00000355560 CITO14578 2027 aa27.47■■□□□ 1.99
CLK2-201ENST00000355560 TREHO43280 583 aa27.47■■□□□ 1.99
CLK2-201ENST00000355560 PURAQ00577 322 aaKnown RBP27.47■■□□□ 1.99
CLK2-201ENST00000355560 BRD3Q15059 726 aa27.47■■□□□ 1.99
CLK2-201ENST00000355560 CC2D1AQ6P1N0 951 aaPredicted RBP27.47■■□□□ 1.99
CLK2-201ENST00000355560 SCARA5Q6ZMJ2 495 aa27.47■■□□□ 1.99
CLK2-201ENST00000355560 CATSPER4Q7RTX7 472 aa27.47■■□□□ 1.99
CLK2-201ENST00000355560 MMGT1Q8N4V1 131 aa27.47■■□□□ 1.99
CLK2-201ENST00000355560 PBKQ96KB5 322 aa27.47■■□□□ 1.99
CLK2-201ENST00000355560 SIX4Q9UIU6 781 aa27.47■■□□□ 1.99
CLK2-201ENST00000355560 DUSP11O75319 330 aaKnown RBP27.46■■□□□ 1.99
CLK2-201ENST00000355560 CYP1A2P05177 515 aa27.46■■□□□ 1.99
CLK2-201ENST00000355560 C6orf222P0C671 652 aaPredicted RBP27.46■■□□□ 1.99
CLK2-201ENST00000355560 ZNF132P52740 706 aa27.46■■□□□ 1.99
CLK2-201ENST00000355560 VSNL1P62760 191 aa27.46■■□□□ 1.99
CLK2-201ENST00000355560 ZNF200P98182 395 aaPredicted RBP27.46■■□□□ 1.99
CLK2-201ENST00000355560 ACAP3Q96P50 834 aa27.46■■□□□ 1.99
CLK2-201ENST00000355560 NUP85Q9BW27 656 aa27.46■■□□□ 1.99
CLK2-201ENST00000355560 CISHQ9NSE2 258 aa27.46■■□□□ 1.99
CLK2-201ENST00000355560 RBM12Q9NTZ6 932 aaKnown RBP27.46■■□□□ 1.99
CLK2-201ENST00000355560 MYADML2A6NDP7 307 aa27.46■■□□□ 1.99
CLK2-201ENST00000355560 SEC31AO94979 1220 aaKnown RBP27.46■■□□□ 1.99
CLK2-201ENST00000355560 ALDH1A1P00352 501 aa27.46■■□□□ 1.99
CLK2-201ENST00000355560 CYBAP13498 195 aa27.46■■□□□ 1.99
CLK2-201ENST00000355560 ASPAP45381 313 aa27.46■■□□□ 1.99
CLK2-201ENST00000355560 RNASE9P60153 205 aaKnown RBP27.46■■□□□ 1.99
CLK2-201ENST00000355560 C11orf63Q6NUN7 778 aa27.46■■□□□ 1.99
CLK2-201ENST00000355560 CPA5Q8WXQ8 436 aa27.46■■□□□ 1.99
CLK2-201ENST00000355560 MROH7Q68CQ1 1323 aa27.45■■□□□ 1.99
CLK2-201ENST00000355560 THAP12O43422 761 aa27.45■■□□□ 1.98
CLK2-201ENST00000355560 MTA2O94776 668 aa27.45■■□□□ 1.98
CLK2-201ENST00000355560 CYP1A1P04798 512 aaPredicted RBP27.45■■□□□ 1.98
CLK2-201ENST00000355560 HOXA11P31270 313 aaPredicted RBP27.45■■□□□ 1.98
CLK2-201ENST00000355560 FLT3LGP49771 235 aa27.45■■□□□ 1.98
CLK2-201ENST00000355560 DCAF4L1Q3SXM0 396 aa27.45■■□□□ 1.98
CLK2-201ENST00000355560 NAA35Q5VZE5 725 aa27.45■■□□□ 1.98
CLK2-201ENST00000355560 MFSD14CQ5VZR4 134 aa27.45■■□□□ 1.98
CLK2-201ENST00000355560 TMEM130Q8N3G9 435 aa27.45■■□□□ 1.98
CLK2-201ENST00000355560 ZNF564Q8TBZ8 553 aaPredicted RBP27.45■■□□□ 1.98
CLK2-201ENST00000355560 CYFIP2Q96F07 1278 aa27.45■■□□□ 1.98
CLK2-201ENST00000355560 C17orf102A2RUQ5 167 aa27.44■■□□□ 1.98
CLK2-201ENST00000355560 ITGB3P05106 788 aa27.44■■□□□ 1.98
CLK2-201ENST00000355560 TUBBP07437 444 aa27.44■■□□□ 1.98
CLK2-201ENST00000355560 CFHP08603 1231 aa27.44■■□□□ 1.98
CLK2-201ENST00000355560 WEE2P0C1S8 567 aa27.44■■□□□ 1.98
CLK2-201ENST00000355560 DARSP14868 501 aaKnown RBP27.44■■□□□ 1.98
CLK2-201ENST00000355560 NSFP46459 744 aaKnown RBP27.44■■□□□ 1.98
CLK2-201ENST00000355560 CENPCQ03188 943 aa27.44■■□□□ 1.98
CLK2-201ENST00000355560 PASD1Q8IV76 773 aa27.44■■□□□ 1.98
CLK2-201ENST00000355560 SELENOOQ9BVL4 669 aa27.44■■□□□ 1.98
CLK2-201ENST00000355560 ARFGAP3Q9NP61 516 aa27.44■■□□□ 1.98
CLK2-201ENST00000355560 NXF1Q9UBU9 619 aaKnown RBP27.44■■□□□ 1.98
CLK2-201ENST00000355560 CNOT8Q9UFF9 292 aaKnown RBP27.44■■□□□ 1.98
CLK2-201ENST00000355560 TARSL2A2RTX5 802 aaKnown RBP27.44■■□□□ 1.98
CLK2-201ENST00000355560 CEP104O60308 925 aa27.44■■□□□ 1.98
CLK2-201ENST00000355560 NPTXRO95502 500 aa27.44■■□□□ 1.98
CLK2-201ENST00000355560 TMEM132DQ14C87 1099 aa27.44■■□□□ 1.98
CLK2-201ENST00000355560 CCDC70Q6NSX1 233 aa27.44■■□□□ 1.98
CLK2-201ENST00000355560 WDR93Q6P2C0 686 aa27.44■■□□□ 1.98
CLK2-201ENST00000355560 TRIM72Q6ZMU5 477 aa27.44■■□□□ 1.98
CLK2-201ENST00000355560 C7orf31Q8N865 590 aa27.44■■□□□ 1.98
CLK2-201ENST00000355560 UVRAGQ9P2Y5 699 aa27.44■■□□□ 1.98
CLK2-201ENST00000355560 ALG6Q9Y672 507 aa27.44■■□□□ 1.98
CLK2-201ENST00000355560 SSTR3P32745 418 aaPredicted RBP27.43■■□□□ 1.98
CLK2-201ENST00000355560 GRM5P41594 1212 aa27.43■■□□□ 1.98
CLK2-201ENST00000355560 ZNF394Q53GI3 561 aa27.43■■□□□ 1.98
CLK2-201ENST00000355560 MCOLN2Q8IZK6 566 aa27.43■■□□□ 1.98
CLK2-201ENST00000355560 TMEM110-MUSTN1A8MSY1 372 aa27.43■■□□□ 1.98
CLK2-201ENST00000355560 ZRANB2O95218 330 aaKnown RBP eCLIP27.43■■□□□ 1.985e-8■□□□□ 10.2
CLK2-201ENST00000355560 EIF4BP23588 611 aaKnown RBP27.43■■□□□ 1.98
CLK2-201ENST00000355560 PRKCZQ05513 592 aa27.43■■□□□ 1.98
CLK2-201ENST00000355560 PCBP1Q15365 356 aaKnown RBP eCLIP27.43■■□□□ 1.986e-6■□□□□ 8.7
CLK2-201ENST00000355560 ZNF667Q5HYK9 610 aa27.43■■□□□ 1.98
CLK2-201ENST00000355560 SLC27A1Q6PCB7 646 aa27.43■■□□□ 1.98
CLK2-201ENST00000355560 CCDC94Q9BW85 323 aaPredicted RBP27.43■■□□□ 1.98
CLK2-201ENST00000355560 POLIQ9UNA4 740 aa27.43■■□□□ 1.98
CLK2-201ENST00000355560 NOMO3P69849 1222 aa27.42■■□□□ 1.98
CLK2-201ENST00000355560 MESDQ14696 234 aa27.42■■□□□ 1.98
CLK2-201ENST00000355560 WDR72Q3MJ13 1102 aa27.42■■□□□ 1.98
CLK2-201ENST00000355560 NOTUMQ6P988 496 aa27.42■■□□□ 1.98
CLK2-201ENST00000355560 APBB1IPQ7Z5R6 666 aaPredicted RBP27.42■■□□□ 1.98
CLK2-201ENST00000355560 USP38Q8NB14 1042 aa27.42■■□□□ 1.98
CLK2-201ENST00000355560 CXorf38Q8TB03 319 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms