RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 ATF5Q9Y2D1 282 aaPredicted RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 E9PCH4 1651 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 RCAN1P53805 252 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 BNIP1Q12981 228 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 EIF2B5Q13144 721 aaKnown RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 AASDHQ4L235 1098 aaPredicted RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 C6orf183Q5T699 404 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 NUP93Q8N1F7 819 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 REXO1Q8N1G1 1221 aaKnown RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 TTC13Q8NBP0 860 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 GALNT6Q8NCL4 622 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 EAF2Q96CJ1 260 aaPredicted RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 ERGIC2Q96RQ1 377 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 LBHD1Q9BQE6 289 aaPredicted RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 DDX56Q9NY93 547 aaKnown RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 PCDHB6Q9Y5E3 794 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 KIF1BO60333 1816 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 PIK3CDO00329 1044 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 MTRF1O75570 445 aaKnown RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 PDE9AO76083 593 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 ANPEPP15144 967 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 PSMC2P35998 433 aaKnown RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 MFAP3P55082 362 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 IQCKQ8N0W5 287 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 SMYD1Q8NB12 490 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 L3MBTL3Q96JM7 780 aaPredicted RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 CSRNP1Q96S65 589 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 GPATCH1Q9BRR8 931 aaKnown RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.28□□□□□ -1.56
SKP1-202ENST00000353411 TBC1D7Q9P0N9 293 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 SPDYE5A6NIY4 337 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 MAP3K13O43283 966 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 GAS2O43903 313 aaKnown RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 IL13P35225 146 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 KRT20P35900 424 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 CLCN2P51788 898 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 RPL26P61254 145 aaKnown RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 PTPN12Q05209 780 aaKnown RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 SLC15A2Q16348 729 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 RWDD4Q6NW29 188 aaKnown RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 STX12Q86Y82 276 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 FBXL13Q8NEE6 735 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 HDAC7Q8WUI4 952 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 EEF2KMTQ96G04 330 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 TRIM51Q9BSJ1 452 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 STK33Q9BYT3 514 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 GPAMQ9HCL2 828 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 VPS45Q9NRW7 570 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 GINM1Q9NU53 330 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 ACTL7BQ9Y614 415 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 CDY2AQ9Y6F7 541 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 CDY1Q9Y6F8 540 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 LZTS3O60299 673 aaPredicted RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 ENTPD5O75356 428 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 CDH2P19022 906 aaPredicted RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 CDC25AP30304 524 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 MYL7Q01449 175 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 EPS8L3Q8TE67 593 aaKnown RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 SCN3BQ9NY72 215 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 KDM6AO15550 1401 aaPredicted RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 GRIN2DO15399 1336 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 ANKRD33BA6NCL7 494 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 ALBP02768 609 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 LDHCP07864 332 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 GSTO1P78417 241 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 PLOD1Q02809 727 aaPredicted RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 EIF4A2Q14240 407 aaKnown RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 SKIV2LQ15477 1246 aaKnown RBP5.28□□□□□ -1.56
SKP1-202ENST00000353411 HIF1AQ16665 826 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 AOC3Q16853 763 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 RUNDC3AQ59EK9 446 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 GPBP1Q86WP2 473 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 CKAP2Q8WWK9 683 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 APBB2Q92870 758 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 RBM15Q96T37 977 aaKnown RBP eCLIP5.28□□□□□ -1.562e-9■■■□□ 18.8
SKP1-202ENST00000353411 STK32BQ9NY57 414 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 SYNPO2Q9UMS6 1093 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 GDAQ9Y2T3 454 aa5.28□□□□□ -1.56
SKP1-202ENST00000353411 PCP4L1A6NKN8 68 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 M0QX08 132 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 PIK3R2O00459 728 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 ANGPT2O15123 496 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 ZBED1O96006 694 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 DPYDQ12882 1025 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 ACVR2BQ13705 512 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 TJAP1Q5JTD0 557 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 LRRC8EQ6NSJ5 796 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 PRUNE1Q86TP1 453 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 LRRC49Q8IUZ0 686 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 ZBED8Q8IZ13 594 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 TTC30BQ8N4P2 665 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 GLMNQ92990 594 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 RNPEPQ9H4A4 650 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 ARHGEF3Q9NR81 526 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 PSTPIP1O43586 416 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 SNRPA1P09661 255 aaKnown RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 FCGR1AP12314 374 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 ADSLP30566 484 aaPredicted RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 EPS8Q12929 822 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 SNX17Q15036 470 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms