RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 CAND2O75155 1236 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 C22orf31O95567 290 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 HOXD8P13378 290 aaPredicted RBP9.2□□□□□ -0.94
TRIM55-204ENST00000353317 STAT1P42224 750 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 PTENP60484 403 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 LACTBP83111 547 aaPredicted RBP9.2□□□□□ -0.94
TRIM55-204ENST00000353317 BEX3Q00994 111 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 PRPF4BQ13523 1007 aaKnown RBP9.2□□□□□ -0.94
TRIM55-204ENST00000353317 ANKRD20A8PQ5CZ79 823 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 IQSEC1Q6DN90 963 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 SLC9A9Q8IVB4 645 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 OR6J1Q8NGC5 347 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 TATDN2Q93075 761 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 CCDC114Q96M63 670 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 PPP1R16BQ96T49 567 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 MYCBPQ99417 103 aaPredicted RBP9.2□□□□□ -0.94
TRIM55-204ENST00000353317 EPB41L4BQ9H329 900 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 MINDY3Q9H8M7 445 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 MYADML2A6NDP7 307 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 H3BRB1 525 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 EXOC3O60645 756 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 SHBGP04278 402 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 SRGAP2CP0DJJ0 459 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 SOX5P35711 763 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 PSMC2P35998 433 aaKnown RBP9.2□□□□□ -0.94
TRIM55-204ENST00000353317 PPP3CAQ08209 521 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 IFFO1Q0D2I5 559 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 LAMTOR4Q0VGL1 99 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 SEZ6Q53EL9 994 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 EFCAB12Q6NXP0 572 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 HS2ST1Q7LGA3 356 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 GPATCH11Q8N954 259 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 RFFLQ8WZ73 363 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 TLCD1Q96CP7 247 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 ARHGEF26Q96DR7 871 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 SYT11Q9BT88 431 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 GPR88Q9GZN0 384 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 TUT1Q9H6E5 874 aaKnown RBP9.2□□□□□ -0.94
TRIM55-204ENST00000353317 TMEM206Q9H813 350 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 C17orf75Q9HAS0 396 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 ZDHHC18Q9NUE0 388 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 RNF186Q9NXI6 227 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 ERAP1Q9NZ08 941 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 CHUKO15111 745 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 TMEM253P0C7T8 217 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 RFC5P40937 340 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 FLT3LGP49771 235 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 DR1Q01658 176 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 PRKCZQ05513 592 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 ZNF211Q13398 564 aaPredicted RBP9.19□□□□□ -0.94
TRIM55-204ENST00000353317 DRAP1Q14919 205 aaPredicted RBP9.19□□□□□ -0.94
TRIM55-204ENST00000353317 DUPD1Q68J44 220 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 CPLX4Q7Z7G2 160 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 PALB2Q86YC2 1186 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 C12orf56Q8IXR9 622 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 CACNA2D3Q8IZS8 1091 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 FUKQ8N0W3 1084 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 LINC01465Q8N7H1 131 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 ERP44Q9BS26 406 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 TARS2Q9BW92 718 aaKnown RBP9.19□□□□□ -0.94
TRIM55-204ENST00000353317 STK33Q9BYT3 514 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 RAB17Q9H0T7 212 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 ACTR5Q9H9F9 607 aaPredicted RBP9.19□□□□□ -0.94
TRIM55-204ENST00000353317 TAS2R14Q9NYV8 317 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 TRIP11Q15643 1979 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 NCANO14594 1321 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 A6NJR5 290 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 HBP1O60381 514 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 TRPA1O75762 1119 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 DRD4P21917 467 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 MAP2K2P36507 400 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 NAMPTP43490 491 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 SCTRP47872 440 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 ERMARDQ5T6L9 678 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 GKAP1Q5VSY0 366 aaPredicted RBP9.19□□□□□ -0.94
TRIM55-204ENST00000353317 AADACL2Q6P093 401 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 CRELD2Q6UXH1 353 aaPredicted RBP9.19□□□□□ -0.94
TRIM55-204ENST00000353317 STXBP4Q6ZWJ1 553 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 CDR2LQ86X02 465 aaPredicted RBP9.19□□□□□ -0.94
TRIM55-204ENST00000353317 RHPN2Q8IUC4 686 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 TMEM174Q8WUU8 243 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 CTNNBL1Q8WYA6 563 aaPredicted RBP9.19□□□□□ -0.94
TRIM55-204ENST00000353317 ALG3Q92685 438 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 APBA2Q99767 749 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 CCDC113Q9H0I3 377 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 THAP2Q9H0W7 228 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 CARD9Q9H257 536 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 TOPORSQ9NS56 1045 aaPredicted RBP9.19□□□□□ -0.94
TRIM55-204ENST00000353317 DNAJC12Q9UKB3 198 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 COG5Q9UP83 839 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 ANK1P16157 1881 aa9.19□□□□□ -0.94
TRIM55-204ENST00000353317 B4GALT5O43286 388 aa9.18□□□□□ -0.94
TRIM55-204ENST00000353317 ADCY3O60266 1144 aa9.18□□□□□ -0.94
TRIM55-204ENST00000353317 MSCO60682 206 aa9.18□□□□□ -0.94
TRIM55-204ENST00000353317 ATP2C2O75185 946 aa9.18□□□□□ -0.94
TRIM55-204ENST00000353317 RGS2P41220 211 aa9.18□□□□□ -0.94
TRIM55-204ENST00000353317 FMO5P49326 533 aa9.18□□□□□ -0.94
TRIM55-204ENST00000353317 EIF3BP55884 814 aaKnown RBP9.18□□□□□ -0.94
TRIM55-204ENST00000353317 BFSP1Q12934 665 aa9.18□□□□□ -0.94
TRIM55-204ENST00000353317 NOGQ13253 232 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms