RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 FBXO41Q8TF61 875 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 ERP44Q9BS26 406 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 HERPUD2Q9BSE4 406 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 SYT11Q9BT88 431 aa11.07□□□□□ -0.64
SMPD4-201ENST00000351288 DDX23Q9BUQ8 820 aaKnown RBP11.07□□□□□ -0.64
SMPD4-201ENST00000351288 CXCL8P10145 99 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 CREB1P16220 341 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 KCNA2P16389 499 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 TNFRSF8P28908 595 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 FMO1Q01740 532 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 SNAPC2Q13487 334 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 CUL1Q13616 776 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 ZNF667Q5HYK9 610 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 SLC39A4Q6P5W5 647 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 KDM7AQ6ZMT4 941 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 CCDC33Q8N5R6 958 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 MTMR14Q8NCE2 650 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 FAM149B1Q96BN6 582 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 XPNPEP1Q9NQW7 623 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 CCDC188H7C350 402 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 MAFGO15525 162 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 RARAP10276 462 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 GTF2H1P32780 548 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 LONRF1Q17RB8 773 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 FASTKD5Q7L8L6 764 aaKnown RBP11.06□□□□□ -0.64
SMPD4-201ENST00000351288 RHOT2Q8IXI1 618 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 C2orf69Q8N8R5 385 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 LENG1Q96BZ8 264 aaPredicted RBP11.06□□□□□ -0.64
SMPD4-201ENST00000351288 MIS12Q9H081 205 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 NGRNQ9NPE2 291 aaKnown RBP11.06□□□□□ -0.64
SMPD4-201ENST00000351288 FAM49BQ9NUQ9 324 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 CTNNAL1Q9UBT7 734 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 MAGED2Q9UNF1 606 aaPredicted RBP11.06□□□□□ -0.64
SMPD4-201ENST00000351288 HES2Q9Y543 173 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 PFASO15067 1338 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 PDHXO00330 501 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 CSPG5O95196 566 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 INSRRP14616 1297 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 GPC3P51654 580 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 OR6B2Q6IFH4 312 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 B3GNT9Q6UX72 402 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 ERICH1Q86X53 443 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 RASGEF1CQ8N431 466 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 GPRC5AQ8NFJ5 357 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 EPN3Q9H201 632 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 CHST7Q9NS84 486 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 AFG3L2Q9Y4W6 797 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 LAMA3Q16787 3333 aa11.06□□□□□ -0.64
SMPD4-201ENST00000351288 KRT1P04264 644 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 RWDD2BP57060 319 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 PTENP60484 403 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 ATP11AP98196 1134 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 KIF22Q14807 665 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 PLCB4Q15147 1175 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 DUOXA2Q1HG44 320 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 ATP13A4Q4VNC1 1196 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 CPLX4Q7Z7G2 160 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 HOOK3Q86VS8 718 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.05□□□□□ -0.64
SMPD4-201ENST00000351288 UBA3Q8TBC4 463 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 RAPGEF5Q92565 580 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 HSPH1Q92598 858 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 THOC1Q96FV9 657 aaKnown RBP11.05□□□□□ -0.64
SMPD4-201ENST00000351288 ZSWIM1Q9BR11 485 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 SETD4Q9NVD3 440 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 PNMA3Q9UL41 463 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 AGAP1Q9UPQ3 857 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 DOCK5Q9H7D0 1870 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 BTNL10A8MVZ5 291 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 RTN2O75298 545 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 PDGFRBP09619 1106 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 ADORA2AP29274 412 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 NUMBP49757 651 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 SKOR1P84550 965 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 POU5F1Q01860 360 aaKnown RBP11.05□□□□□ -0.64
SMPD4-201ENST00000351288 LAMTOR4Q0VGL1 99 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 KCNT1Q5JUK3 1230 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 C1orf131Q8NDD1 294 aaKnown RBP11.05□□□□□ -0.64
SMPD4-201ENST00000351288 SLC17A8Q8NDX2 589 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 OR6B3Q8NGW1 331 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.05□□□□□ -0.64
SMPD4-201ENST00000351288 RAB17Q9H0T7 212 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 SOWAHBA6NEL2 793 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 HMGB1P1B2RPK0 211 aaPredicted RBP11.05□□□□□ -0.64
SMPD4-201ENST00000351288 KIAA0391O15091 583 aaKnown RBP11.05□□□□□ -0.64
SMPD4-201ENST00000351288 STAM2O75886 525 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 RGS20O76081 388 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 PMS2P54278 862 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 ATF7IP2Q5U623 682 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 DENND2CQ68D51 928 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 OR6J1Q8NGC5 347 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 CALR3Q96L12 384 aaKnown RBP11.05□□□□□ -0.64
SMPD4-201ENST00000351288 MAK16Q9BXY0 300 aaKnown RBP11.05□□□□□ -0.64
SMPD4-201ENST00000351288 VPS33BQ9H267 617 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 RRAGCQ9HB90 399 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 NOCTQ9UK39 431 aaKnown RBP11.05□□□□□ -0.64
SMPD4-201ENST00000351288 TTLL3Q9Y4R7 772 aa11.05□□□□□ -0.64
SMPD4-201ENST00000351288 LAMA2P24043 3122 aaKnown RBP11.05□□□□□ -0.64
SMPD4-201ENST00000351288 UMODL1Q5DID0 1318 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 A0A0A6YYK5 440 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms