RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 HMGCS2P54868 508 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 CRELD2Q6UXH1 353 aaPredicted RBP16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 ANKS4BQ8N8V4 417 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 CCDC89Q8N998 374 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 EXD1Q8NHP7 514 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 CCHCR1Q8TD31 782 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 ZNF317Q96PQ6 595 aaPredicted RBP16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 SELENOSQ9BQE4 189 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 NSRP1Q9H0G5 558 aaKnown RBP16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 ADAM7Q9H2U9 754 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 KDM4CQ9H3R0 1056 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 NRBP2Q9NSY0 501 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 ADAM22Q9P0K1 906 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 SCAF8Q9UPN6 1271 aaKnown RBP16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 PCDHB4Q9Y5E5 795 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 DOCK1Q14185 1865 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 IGKV6D-21A0A0A0MT36 114 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 VNN1O95497 513 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 CLTAP09496 248 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 FGFR4P22455 802 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 GLRA2P23416 452 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 IVDP26440 423 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 NLRP11P59045 1033 aaKnown RBP16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 NOMO3P69849 1222 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 RELL1Q8IUW5 271 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 ATXN2LQ8WWM7 1075 aaKnown RBP16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 SCLT1Q96NL6 688 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 LRRC4CQ9HCJ2 640 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 PARVAQ9NVD7 372 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 ANAPC5Q9UJX4 755 aa16.46■□□□□ 0.23
TNFSF13-202ENST00000349228 NDC80O14777 642 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 THAP12O43422 761 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 TTC4O95801 387 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 GNA15P30679 374 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 IFI35P80217 286 aaPredicted RBP16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 KLF1Q13351 362 aaPredicted RBP16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 MAMLD1Q13495 774 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 ITIH4Q14624 930 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 QPCTQ16769 361 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 ZPBP2Q6X784 338 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 CCDC197Q8NCU1 140 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 MDM1Q8TC05 714 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 MSTO1Q9BUK6 570 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 IMPG2Q9BZV3 1241 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 CDC42EP4Q9H3Q1 356 aaKnown RBP16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 IP6K2Q9UHH9 426 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 ARID2Q68CP9 1835 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 LRRIQ4A6NIV6 560 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 ACOT2P49753 483 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 NOL9Q5SY16 702 aaKnown RBP16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 SAMD7Q7Z3H4 446 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 CCDC25Q86WR0 208 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 CCDC77Q9BR77 488 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 PDGFDQ9GZP0 370 aaPredicted RBP16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 CHST7Q9NS84 486 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 FBXO40Q9UH90 709 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 PPP2R3BQ9Y5P8 575 aa16.45■□□□□ 0.22
TNFSF13-202ENST00000349228 UMODL1Q5DID0 1318 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 LTBP3Q9NS15 1303 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 PARP14Q460N5 1801 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 LSM8O95777 96 aaKnown RBP16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 ATP4AP20648 1035 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 ADCY8P40145 1251 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 EFNA5P52803 228 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 SP4Q02446 784 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 TAP1Q03518 808 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 SNX1Q13596 522 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 SURF1Q15526 300 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 LRRC38Q5VT99 294 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 ZNF365Q70YC5 407 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 PIGWQ7Z7B1 504 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 EXOC8Q8IYI6 725 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 RCOR2Q8IZ40 523 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 RBBP8NLQ8NC74 664 aaPredicted RBP16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 FEZF2Q8TBJ5 459 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 ASAP3Q8TDY4 903 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 EPS8L3Q8TE67 593 aaKnown RBP16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 KAT2BQ92831 832 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 ZKSCAN4Q969J2 545 aaPredicted RBP16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 TMEM143Q96AN5 459 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 RBM41Q96IZ5 413 aaKnown RBP16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 OSBPL8Q9BZF1 889 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 AAASQ9NRG9 546 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 NEU2Q9Y3R4 380 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 ADGRA2Q96PE1 1338 aa16.44■□□□□ 0.22
TNFSF13-202ENST00000349228 PHIPQ8WWQ0 1821 aa16.43■□□□□ 0.22
TNFSF13-202ENST00000349228 TP73O15350 636 aa16.43■□□□□ 0.22
TNFSF13-202ENST00000349228 CALB1P05937 261 aa16.43■□□□□ 0.22
TNFSF13-202ENST00000349228 ITGA8P53708 1063 aa16.43■□□□□ 0.22
TNFSF13-202ENST00000349228 COPS2P61201 443 aa16.43■□□□□ 0.22
TNFSF13-202ENST00000349228 SH3D19Q5HYK7 790 aa16.43■□□□□ 0.22
TNFSF13-202ENST00000349228 FAM160B1Q5W0V3 765 aa16.43■□□□□ 0.22
TNFSF13-202ENST00000349228 DRICH1Q6PGQ1 229 aaPredicted RBP16.43■□□□□ 0.22
TNFSF13-202ENST00000349228 TMEM270Q6UE05 265 aa16.43■□□□□ 0.22
TNFSF13-202ENST00000349228 CCDC50Q8IVM0 306 aa16.43■□□□□ 0.22
TNFSF13-202ENST00000349228 ZNF518BQ9C0D4 1074 aa16.43■□□□□ 0.22
TNFSF13-202ENST00000349228 APOBEC3GQ9HC16 384 aaKnown RBP16.43■□□□□ 0.22
TNFSF13-202ENST00000349228 SAMD15Q9P1V8 674 aa16.43■□□□□ 0.22
TNFSF13-202ENST00000349228 CNTNAP2Q9UHC6 1331 aa16.43■□□□□ 0.22
TNFSF13-202ENST00000349228 SMIM23A6NLE4 172 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms