RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 KLHL11Q9NVR0 708 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 TAGLN3Q9UI15 199 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 ANGPT2O15123 496 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 TOB1P50616 345 aaPredicted RBP18.98■□□□□ 0.63
SMC4-201ENST00000344722 CREG2Q8IUH2 290 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 PLD3Q8IV08 490 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 HERC5Q9UII4 1024 aaKnown RBP18.98■□□□□ 0.63
SMC4-201ENST00000344722 P4HA2O15460 535 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 SNAP25P60880 206 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 HLFQ16534 295 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 HABP4Q5JVS0 413 aaKnown RBP18.98■□□□□ 0.63
SMC4-201ENST00000344722 TTC33Q6PID6 262 aaPredicted RBP18.98■□□□□ 0.63
SMC4-201ENST00000344722 ARMCX2Q7L311 632 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 PGM2Q96G03 612 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 PPME1Q9Y570 386 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 ADGRA3Q8IWK6 1321 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 OSTNP61366 133 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 FASTKD1Q53R41 847 aaKnown RBP18.97■□□□□ 0.63
SMC4-201ENST00000344722 MIGA2Q7L4E1 593 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 NEDD1Q8NHV4 660 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 NEMP1O14524 444 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 EIF3DO15371 548 aaKnown RBP eCLIP18.97■□□□□ 0.632e-16■■■■■ 56.2
SMC4-201ENST00000344722 S100A5P33763 92 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 DEFA1P59665 94 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 DEFA3P59666 94 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 TATDN2Q93075 761 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 C8orf37Q96NL8 207 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 LXNQ9BS40 222 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 AP3M2P53677 418 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 PTENP60484 403 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 THAP2Q9H0W7 228 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 CDYLQ9Y232 598 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 AP1G2O75843 785 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 PSMC3P17980 439 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 PIGHQ14442 188 aaPredicted RBP18.97■□□□□ 0.63
SMC4-201ENST00000344722 ITPRIPL1Q6GPH6 555 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 PRUNE1Q86TP1 453 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 TMCO5AQ8N6Q1 288 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 SLC44A5Q8NCS7 719 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 PLA2G12BQ9BX93 195 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 PACSIN1Q9BY11 444 aa18.97■□□□□ 0.63
SMC4-201ENST00000344722 TBC1D4O60343 1298 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 QARSP47897 775 aaKnown RBP18.96■□□□□ 0.63
SMC4-201ENST00000344722 HAUS6Q7Z4H7 955 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 CDR2LQ86X02 465 aaPredicted RBP18.96■□□□□ 0.63
SMC4-201ENST00000344722 FOXP4Q8IVH2 680 aaPredicted RBP18.96■□□□□ 0.63
SMC4-201ENST00000344722 MCM8Q9UJA3 840 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 M0R3G1 203 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 KCNN4O15554 427 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 CCDC15Q0P6D6 951 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 CASP10Q92851 521 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 MPP4Q96JB8 637 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 PRPF18Q99633 342 aaKnown RBP18.96■□□□□ 0.63
SMC4-201ENST00000344722 AGXT2Q9BYV1 514 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 MYBP10242 640 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 ABCE1P61221 599 aaKnown RBP18.96■□□□□ 0.63
SMC4-201ENST00000344722 CPA5Q8WXQ8 436 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 BTBD10Q9BSF8 475 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 UNC45AQ9H3U1 944 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 HSPBP1Q9NZL4 362 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 SERPINB8P50452 374 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 M0QYV0 167 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 RIPK2O43353 540 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 NUP107P57740 925 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 ERVK-9P63128 1117 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 MTMR1Q13613 665 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 EPHA7Q15375 998 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 PCYOX1LQ8NBM8 494 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 FAM111AQ96PZ2 611 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 CYP39A1Q9NYL5 469 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 GTF3C4Q9UKN8 822 aa18.96■□□□□ 0.63
SMC4-201ENST00000344722 MYL2P10916 166 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 ITGB3BPQ13352 177 aaPredicted RBP18.95■□□□□ 0.62
SMC4-201ENST00000344722 LRRC74BQ6ZQY2 392 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 AGAP11Q8TF27 550 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 INPP5DQ92835 1189 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 RMDN2Q96LZ7 410 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 FRMD8Q9BZ67 464 aaPredicted RBP18.95■□□□□ 0.62
SMC4-201ENST00000344722 KCND2Q9NZV8 630 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 CORO1CQ9ULV4 474 aaPredicted RBP18.95■□□□□ 0.62
SMC4-201ENST00000344722 LOC100653049A0A140TA62 436 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 PPIP5K2O43314 1243 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 SNX2O60749 519 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 KRT34O76011 436 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 ROR2Q01974 943 aaKnown RBP18.95■□□□□ 0.62
SMC4-201ENST00000344722 MKRN4PQ13434 485 aaPredicted RBP18.95■□□□□ 0.62
SMC4-201ENST00000344722 QRICH1Q2TAL8 776 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 TMEM120AQ9BXJ8 343 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 EPB41L4AQ9HCS5 686 aaPredicted RBP18.95■□□□□ 0.62
SMC4-201ENST00000344722 ZNF212Q9UDV6 495 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 TBX3O15119 743 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 RFC5P40937 340 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 EFHC1Q5JVL4 640 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 MREGQ8N565 214 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 ASPSCR1Q9BZE9 553 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 RAB6BQ9NRW1 208 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 C2CD2Q9Y426 696 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 RAP1GDS1P52306 607 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 PMS1P54277 932 aaKnown RBP18.95■□□□□ 0.62
SMC4-201ENST00000344722 KRT76Q01546 638 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms