RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 TNFAIP2Q03169 654 aa19.9■□□□□ 0.78
HOXA9-201ENST00000343483 TCEAL1Q15170 157 aa19.9■□□□□ 0.78
HOXA9-201ENST00000343483 TAF1CQ15572 869 aaPredicted RBP19.9■□□□□ 0.78
HOXA9-201ENST00000343483 GRIK4Q16099 956 aa19.9■□□□□ 0.78
HOXA9-201ENST00000343483 C11orf63Q6NUN7 778 aa19.9■□□□□ 0.78
HOXA9-201ENST00000343483 NLRP7Q8WX94 980 aa19.9■□□□□ 0.78
HOXA9-201ENST00000343483 CALR3Q96L12 384 aaKnown RBP19.9■□□□□ 0.78
HOXA9-201ENST00000343483 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.9■□□□□ 0.78
HOXA9-201ENST00000343483 PLEKHA4Q9H4M7 779 aa19.9■□□□□ 0.78
HOXA9-201ENST00000343483 EPB41L5Q9HCM4 733 aa19.9■□□□□ 0.78
HOXA9-201ENST00000343483 GTF3C4Q9UKN8 822 aa19.9■□□□□ 0.78
HOXA9-201ENST00000343483 ALG6Q9Y672 507 aa19.9■□□□□ 0.78
HOXA9-201ENST00000343483 ASS1P00966 412 aaKnown RBP19.89■□□□□ 0.77
HOXA9-201ENST00000343483 CYP1A2P05177 515 aa19.89■□□□□ 0.77
HOXA9-201ENST00000343483 HOXC6P09630 235 aa19.89■□□□□ 0.77
HOXA9-201ENST00000343483 CXCL8P10145 99 aa19.89■□□□□ 0.77
HOXA9-201ENST00000343483 POU5F1BQ06416 359 aa19.89■□□□□ 0.77
HOXA9-201ENST00000343483 TRPC3Q13507 836 aa19.89■□□□□ 0.77
HOXA9-201ENST00000343483 MESDQ14696 234 aa19.89■□□□□ 0.77
HOXA9-201ENST00000343483 ZNF677Q86XU0 584 aa19.89■□□□□ 0.77
HOXA9-201ENST00000343483 KLHL7Q8IXQ5 586 aa19.89■□□□□ 0.77
HOXA9-201ENST00000343483 TMEM192Q8IY95 271 aa19.89■□□□□ 0.77
HOXA9-201ENST00000343483 RBBP8NLQ8NC74 664 aaPredicted RBP19.89■□□□□ 0.77
HOXA9-201ENST00000343483 ZNF564Q8TBZ8 553 aaPredicted RBP19.89■□□□□ 0.77
HOXA9-201ENST00000343483 RIN2Q8WYP3 895 aaPredicted RBP19.89■□□□□ 0.77
HOXA9-201ENST00000343483 AP1M1Q9BXS5 423 aa19.89■□□□□ 0.77
HOXA9-201ENST00000343483 FAM204AQ9H8W3 233 aa19.89■□□□□ 0.77
HOXA9-201ENST00000343483 TMEM59LQ9UK28 342 aa19.89■□□□□ 0.77
HOXA9-201ENST00000343483 THSD7BQ9C0I4 1608 aa19.89■□□□□ 0.77
HOXA9-201ENST00000343483 AGPSO00116 658 aa19.88■□□□□ 0.77
HOXA9-201ENST00000343483 DDX3YO15523 660 aaKnown RBP19.88■□□□□ 0.77
HOXA9-201ENST00000343483 MAP2K2P36507 400 aa19.88■□□□□ 0.77
HOXA9-201ENST00000343483 EFCAB13Q8IY85 973 aa19.88■□□□□ 0.77
HOXA9-201ENST00000343483 CPA5Q8WXQ8 436 aa19.88■□□□□ 0.77
HOXA9-201ENST00000343483 CAVIN3Q969G5 261 aa19.88■□□□□ 0.77
HOXA9-201ENST00000343483 CPB2Q96IY4 423 aa19.88■□□□□ 0.77
HOXA9-201ENST00000343483 RPF1Q9H9Y2 349 aaKnown RBP19.88■□□□□ 0.77
HOXA9-201ENST00000343483 GPR25O00155 361 aa19.88■□□□□ 0.77
HOXA9-201ENST00000343483 DYNC1LI2O43237 492 aaPredicted RBP19.88■□□□□ 0.77
HOXA9-201ENST00000343483 ZEB2O60315 1214 aa19.88■□□□□ 0.77
HOXA9-201ENST00000343483 HOXD8P13378 290 aaPredicted RBP19.88■□□□□ 0.77
HOXA9-201ENST00000343483 GNA15P30679 374 aa19.88■□□□□ 0.77
HOXA9-201ENST00000343483 MAP2K5Q13163 448 aa19.88■□□□□ 0.77
HOXA9-201ENST00000343483 MORN1Q5T089 497 aa19.88■□□□□ 0.77
HOXA9-201ENST00000343483 MARCH8Q5T0T0 291 aa19.88■□□□□ 0.77
HOXA9-201ENST00000343483 GOLGA6L1Q8N7Z2 621 aa19.88■□□□□ 0.77
HOXA9-201ENST00000343483 IFT81Q8WYA0 676 aa19.88■□□□□ 0.77
HOXA9-201ENST00000343483 CNOT8Q9UFF9 292 aaKnown RBP19.88■□□□□ 0.77
HOXA9-201ENST00000343483 CENPFP49454 3210 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 ESYT3A0FGR9 886 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 ZSCAN5CA6NGD5 496 aaPredicted RBP19.87■□□□□ 0.77
HOXA9-201ENST00000343483 MANSC4A6NHS7 340 aaPredicted RBP19.87■□□□□ 0.77
HOXA9-201ENST00000343483 MTA2O94776 668 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 TNNC2P02585 160 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 HSPA1AP0DMV8 641 aaKnown RBP19.87■□□□□ 0.77
HOXA9-201ENST00000343483 HSPA1BP0DMV9 641 aaKnown RBP19.87■□□□□ 0.77
HOXA9-201ENST00000343483 UNGP13051 313 aaPredicted RBP19.87■□□□□ 0.77
HOXA9-201ENST00000343483 SSTR3P32745 418 aaPredicted RBP19.87■□□□□ 0.77
HOXA9-201ENST00000343483 CARSP49589 748 aaKnown RBP19.87■□□□□ 0.77
HOXA9-201ENST00000343483 PAK2Q13177 524 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 AMHR2Q16671 573 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 FAM187BQ17R55 369 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 DCAF12L1Q5VU92 463 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 NAA35Q5VZE5 725 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 PASD1Q8IV76 773 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 RASGEF1CQ8N431 466 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 ANKRD36BP1Q96IX9 119 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 BTBD6Q96KE9 485 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 KRIT1O00522 736 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 RAD51CO43502 376 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 CD58P19256 250 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 COMTP21964 271 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 NSFP46459 744 aaKnown RBP19.87■□□□□ 0.77
HOXA9-201ENST00000343483 NNTQ13423 1086 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 SGSM1Q2NKQ1 1148 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 PDZD7Q9H5P4 517 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 SETD4Q9NVD3 440 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 WBP1LQ9NX94 342 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 FLRT1Q9NZU1 646 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 UVRAGQ9P2Y5 699 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 NFU1Q9UMS0 254 aa19.87■□□□□ 0.77
HOXA9-201ENST00000343483 THAP12O43422 761 aa19.86■□□□□ 0.77
HOXA9-201ENST00000343483 B4GALT4O60513 344 aa19.86■□□□□ 0.77
HOXA9-201ENST00000343483 ZNF699Q32M78 642 aa19.86■□□□□ 0.77
HOXA9-201ENST00000343483 IFNLR1Q8IU57 520 aaPredicted RBP19.86■□□□□ 0.77
HOXA9-201ENST00000343483 ALG3Q92685 438 aa19.86■□□□□ 0.77
HOXA9-201ENST00000343483 LENG1Q96BZ8 264 aaPredicted RBP19.86■□□□□ 0.77
HOXA9-201ENST00000343483 CYFIP2Q96F07 1278 aa19.86■□□□□ 0.77
HOXA9-201ENST00000343483 NIF3L1Q9GZT8 377 aa19.86■□□□□ 0.77
HOXA9-201ENST00000343483 CNTN6Q9UQ52 1028 aa19.86■□□□□ 0.77
HOXA9-201ENST00000343483 IL18RAPO95256 599 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 FGGP02679 453 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 CFHP08603 1231 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 STAG3L1P0CL83 205 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 ARF4P18085 180 aaPredicted RBP19.85■□□□□ 0.77
HOXA9-201ENST00000343483 ZNF211Q13398 564 aaPredicted RBP19.85■□□□□ 0.77
HOXA9-201ENST00000343483 SCARA5Q6ZMJ2 495 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 MCOLN2Q8IZK6 566 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 UBL4BQ8N7F7 174 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 TSEN2Q8NCE0 465 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms