RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 KSR1Q8IVT5 923 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 FAM178BQ8IXR5 827 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 ZNF75CPQ92670 426 aaPredicted RBP10.26□□□□□ -0.77
HOXA1-201ENST00000343060 EZH1Q92800 747 aaPredicted RBP10.26□□□□□ -0.77
HOXA1-201ENST00000343060 SMC6Q96SB8 1091 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 EPAS1Q99814 870 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 PAIP2Q9BPZ3 127 aaKnown RBP10.26□□□□□ -0.77
HOXA1-201ENST00000343060 PCMTD2Q9NV79 361 aa10.26□□□□□ -0.77
HOXA1-201ENST00000343060 MYH11P35749 1972 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 GSC2O15499 205 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 RPA3P35244 121 aaPredicted RBP10.25□□□□□ -0.77
HOXA1-201ENST00000343060 SLC1A1P43005 524 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 VAMP7P51809 220 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 DLG4P78352 724 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 KPNB1Q14974 876 aaKnown RBP10.25□□□□□ -0.77
HOXA1-201ENST00000343060 CCDC6Q16204 474 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 PKN2Q16513 984 aaKnown RBP10.25□□□□□ -0.77
HOXA1-201ENST00000343060 PLEKHG4Q58EX7 1191 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 SDCCAG8Q86SQ7 713 aaPredicted RBP10.25□□□□□ -0.77
HOXA1-201ENST00000343060 ZNF276Q8N554 614 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 KAT5Q92993 513 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 KREMEN1Q96MU8 473 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 RBM15Q96T37 977 aaKnown RBP eCLIP10.25□□□□□ -0.77
HOXA1-201ENST00000343060 CDCA7Q9BWT1 371 aaPredicted RBP10.25□□□□□ -0.77
HOXA1-201ENST00000343060 SYNCQ9H7C4 482 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 DMAP1Q9NPF5 467 aaPredicted RBP10.25□□□□□ -0.77
HOXA1-201ENST00000343060 AVENQ9NQS1 362 aaPredicted RBP10.25□□□□□ -0.77
HOXA1-201ENST00000343060 SLAIN2Q9P270 581 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 SLC24A2Q9UI40 661 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 SLC4A7Q9Y6M7 1214 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 CNTNAP4Q9C0A0 1308 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 FAM196BA6NMK8 535 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 TBX10O75333 385 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 MYBL1P10243 752 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 SHMT1P34896 483 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 KRT72Q14CN4 511 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 ACAD10Q6JQN1 1059 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 MTDHQ86UE4 582 aaKnown RBP10.25□□□□□ -0.77
HOXA1-201ENST00000343060 ARHGAP18Q8N392 663 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.25□□□□□ -0.77
HOXA1-201ENST00000343060 LINC00116Q8NCU8 138 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 B4GALNT2Q8NHY0 566 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 DDX1Q92499 740 aaKnown RBP10.25□□□□□ -0.77
HOXA1-201ENST00000343060 SLC5A5Q92911 643 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 SKA1Q96BD8 255 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 CD209Q9NNX6 404 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 KRT82Q9NSB4 513 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 ANKFY1Q9P2R3 1169 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 FETUBQ9UGM5 382 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 TBC1D30Q9Y2I9 924 aa10.25□□□□□ -0.77
HOXA1-201ENST00000343060 IGLV3-22A0A075B6J6 115 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 A8MXQ7 604 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 PIK3CDO00329 1044 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 CAPN9O14815 690 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 GRIN3BO60391 1043 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 HAUS5O94927 633 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 SLITRK3O94933 977 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 TROVE2P10155 538 aaKnown RBP eCLIP10.24□□□□□ -0.77
HOXA1-201ENST00000343060 GRAPQ13588 217 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 NSMFQ6X4W1 530 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 ZNF365Q70YC5 407 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 SLC47A2Q86VL8 602 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 NBPF5PQ86XG9 351 aaPredicted RBP10.24□□□□□ -0.77
HOXA1-201ENST00000343060 KBTBD2Q8IY47 623 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 GRAPLQ8TC17 118 aaPredicted RBP10.24□□□□□ -0.77
HOXA1-201ENST00000343060 DCAF4Q8WV16 495 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 IWS1Q96ST2 819 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 ZNF184Q99676 751 aaPredicted RBP10.24□□□□□ -0.77
HOXA1-201ENST00000343060 ARL8BQ9NVJ2 186 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 STRCQ7RTU9 1775 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 UMODL1Q5DID0 1318 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 DNALI1O14645 258 aaPredicted RBP10.24□□□□□ -0.77
HOXA1-201ENST00000343060 CYP26A1O43174 497 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 CYP11B1P15538 503 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 CA4P22748 312 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 RAP1GDS1P52306 607 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 SESN3P58005 492 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 PPP2R5CQ13362 524 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 HHATQ5VTY9 493 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 DAB2IPQ5VWQ8 1189 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 PCNX4Q63HM2 1172 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 CYP4F22Q6NT55 531 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 SLC51AQ86UW1 340 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 ZC3H18Q86VM9 953 aaKnown RBP10.24□□□□□ -0.77
HOXA1-201ENST00000343060 NSL1Q96IY1 281 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 RBM41Q96IZ5 413 aaKnown RBP10.24□□□□□ -0.77
HOXA1-201ENST00000343060 FAM81BQ96LP2 452 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 NPHS2Q9NP85 383 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 ANAPC7Q9UJX3 599 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 DAGLAQ9Y4D2 1042 aa10.24□□□□□ -0.77
HOXA1-201ENST00000343060 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.24□□□□□ -0.77
HOXA1-201ENST00000343060 GSTTP1A0A1W2PQM5 241 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 MAP3K7O43318 606 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 PSTPIP1O43586 416 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 IL1BP01584 269 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 FDX1P10109 184 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 MAPK4P31152 587 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 VPS41P49754 854 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 POLE2P56282 527 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 MAPK6Q16659 721 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms