RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 PIGHQ14442 188 aaPredicted RBP7.59□□□□□ -1.19
VCAN-202ENST00000342785 SAMD7Q7Z3H4 446 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 NT5DC3Q86UY8 548 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 CERS5Q8N5B7 392 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 TMC2Q8TDI7 906 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 KCNMB3Q9NPA1 279 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 MID2Q9UJV3 735 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 CFLARO15519 480 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 CENPCQ03188 943 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 RAB6BQ9NRW1 208 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 APOBEC2Q9Y235 224 aaKnown RBP7.59□□□□□ -1.19
VCAN-202ENST00000342785 SPECC1L-ADORA2AF8WAN1 911 aa7.59□□□□□ -1.2
VCAN-202ENST00000342785 CASQ2O14958 399 aaPredicted RBP7.59□□□□□ -1.2
VCAN-202ENST00000342785 SMIM24O75264 130 aa7.59□□□□□ -1.2
VCAN-202ENST00000342785 HNRNPH1P31943 449 aaKnown RBP7.59□□□□□ -1.2
VCAN-202ENST00000342785 MXD4Q14582 209 aaPredicted RBP7.59□□□□□ -1.2
VCAN-202ENST00000342785 SMAD1Q15797 465 aaKnown RBP7.59□□□□□ -1.2
VCAN-202ENST00000342785 C1orf131Q8NDD1 294 aaKnown RBP7.59□□□□□ -1.2
VCAN-202ENST00000342785 RBM46Q8TBY0 533 aaKnown RBP7.59□□□□□ -1.2
VCAN-202ENST00000342785 NUDCD1Q96RS6 583 aa7.59□□□□□ -1.2
VCAN-202ENST00000342785 Q9H521 79 aa7.59□□□□□ -1.2
VCAN-202ENST00000342785 SCOCQ9UIL1 159 aa7.59□□□□□ -1.2
VCAN-202ENST00000342785 F5H423 210 aaPredicted RBP7.58□□□□□ -1.2
VCAN-202ENST00000342785 HSPA4LO95757 839 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 APRTP07741 180 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 RPAINQ86UA6 219 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 RSPH3Q86UC2 560 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 C4orf19Q8IY42 314 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 LRRC71Q8N4P6 559 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 AGBL3Q8NEM8 1001 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 KIF12Q96FN5 646 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 STAP1Q9ULZ2 295 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 SNX9Q9Y5X1 595 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 SIGLEC1Q9BZZ2 1709 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 MEIS2O14770 477 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 RGS7P49802 495 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 EPHB1P54762 984 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 CUL2Q13617 745 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 BTNL9Q6UXG8 535 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 TEX2Q8IWB9 1127 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 KIF2BQ8N4N8 673 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 BEST2Q8NFU1 509 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 SLC40A1Q9NP59 571 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 KCNQ5Q9NR82 932 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 MAP3K7O43318 606 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 ARL13BQ3SXY8 428 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 DSTYKQ6XUX3 929 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 ZNF662Q6ZS27 426 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 CDKL3Q8IVW4 592 aaPredicted RBP7.58□□□□□ -1.2
VCAN-202ENST00000342785 MIPOL1Q8TD10 442 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 HDAC11Q96DB2 347 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 SERPINB12Q96P63 405 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 FAM167BQ9BTA0 163 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 CDC42EP4Q9H3Q1 356 aaKnown RBP7.58□□□□□ -1.2
VCAN-202ENST00000342785 CHMP2BQ9UQN3 213 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 PIK3R2O00459 728 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 KITP10721 976 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 GARTP22102 1010 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 THOC5Q13769 683 aaKnown RBP7.58□□□□□ -1.2
VCAN-202ENST00000342785 CBWD6Q4V339 395 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 CBWD3Q5JTY5 395 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 CBWD5Q5RIA9 395 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 SH2D4BQ5SQS7 431 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 SLC47A2Q86VL8 602 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 MYOZ2Q9NPC6 264 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 PSMC3IPQ9P2W1 217 aaPredicted RBP7.58□□□□□ -1.2
VCAN-202ENST00000342785 PNMA3Q9UL41 463 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 FIS1Q9Y3D6 152 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.58□□□□□ -1.2
VCAN-202ENST00000342785 RICTORQ6R327 1708 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 KRT10P13645 584 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 ADORA2BP29275 332 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 TYK2P29597 1187 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 RFC5P40937 340 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 ZNF844Q08AG5 666 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 DNAJC3Q13217 504 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 SMTNL2Q2TAL5 461 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 DACT2Q5SW24 774 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 ANGEL2Q5VTE6 544 aaKnown RBP7.58□□□□□ -1.2
VCAN-202ENST00000342785 MKL1Q969V6 931 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 ACSF2Q96CM8 615 aaPredicted RBP7.58□□□□□ -1.2
VCAN-202ENST00000342785 ARHGEF26Q96DR7 871 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 GRAP2O75791 330 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 BRD2P25440 801 aaKnown RBP7.58□□□□□ -1.2
VCAN-202ENST00000342785 SLC12A3P55017 1021 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 SESN2P58004 480 aaPredicted RBP7.58□□□□□ -1.2
VCAN-202ENST00000342785 GPR162Q16538 588 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 C3orf62Q6ZUJ4 267 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 SPATA18Q8TC71 538 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 KAT5Q92993 513 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 VPS39Q96JC1 886 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 INPP4AQ96PE3 977 aaPredicted RBP7.58□□□□□ -1.2
VCAN-202ENST00000342785 ZC3H7BQ9UGR2 993 aaKnown RBP7.58□□□□□ -1.2
VCAN-202ENST00000342785 ANGPTL2Q9UKU9 493 aa7.58□□□□□ -1.2
VCAN-202ENST00000342785 CCDC195A0A1B0GUA6 201 aa7.57□□□□□ -1.2
VCAN-202ENST00000342785 CREB3O43889 395 aa7.57□□□□□ -1.2
VCAN-202ENST00000342785 PROSCO94903 275 aa7.57□□□□□ -1.2
VCAN-202ENST00000342785 RAD23BP54727 409 aa7.57□□□□□ -1.2
VCAN-202ENST00000342785 GRAMD1BQ3KR37 738 aa7.57□□□□□ -1.2
VCAN-202ENST00000342785 TWF2Q6IBS0 349 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms