RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 P4HA1P13674 534 aa17.59■□□□□ 0.41
SNED1-202ENST00000342631 IBSPP21815 317 aaPredicted RBP17.59■□□□□ 0.41
SNED1-202ENST00000342631 TBXAS1P24557 533 aaPredicted RBP17.59■□□□□ 0.41
SNED1-202ENST00000342631 MYL6P60660 151 aa17.59■□□□□ 0.41
SNED1-202ENST00000342631 WDR5P61964 334 aaKnown RBP17.59■□□□□ 0.41
SNED1-202ENST00000342631 NOP14P78316 857 aaKnown RBP17.59■□□□□ 0.41
SNED1-202ENST00000342631 ZBED6P86452 979 aa17.59■□□□□ 0.41
SNED1-202ENST00000342631 TUSC3Q13454 348 aa17.59■□□□□ 0.41
SNED1-202ENST00000342631 ZNF699Q32M78 642 aa17.59■□□□□ 0.41
SNED1-202ENST00000342631 PHLDB3Q6NSJ2 640 aa17.59■□□□□ 0.41
SNED1-202ENST00000342631 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.59■□□□□ 0.41
SNED1-202ENST00000342631 C16orf59Q7L2K0 433 aa17.59■□□□□ 0.41
SNED1-202ENST00000342631 FAM84AQ96KN4 292 aa17.59■□□□□ 0.41
SNED1-202ENST00000342631 ZNF560Q96MR9 790 aa17.59■□□□□ 0.41
SNED1-202ENST00000342631 XYLT2Q9H1B5 865 aa17.59■□□□□ 0.41
SNED1-202ENST00000342631 FAM124BQ9H5Z6 455 aaPredicted RBP17.59■□□□□ 0.41
SNED1-202ENST00000342631 PLAGL2Q9UPG8 496 aa17.59■□□□□ 0.41
SNED1-202ENST00000342631 INPP5FQ9Y2H2 1132 aa17.59■□□□□ 0.41
SNED1-202ENST00000342631 AKR1B15C9JRZ8 316 aaPredicted RBP17.58■□□□□ 0.4
SNED1-202ENST00000342631 PIRO00625 290 aa17.58■□□□□ 0.4
SNED1-202ENST00000342631 FGFR1P11362 822 aa17.58■□□□□ 0.4
SNED1-202ENST00000342631 CASP14P31944 242 aa17.58■□□□□ 0.4
SNED1-202ENST00000342631 MFAP3P55082 362 aa17.58■□□□□ 0.4
SNED1-202ENST00000342631 POLR2FP61218 127 aaKnown RBP17.58■□□□□ 0.4
SNED1-202ENST00000342631 HPDLQ96IR7 371 aa17.58■□□□□ 0.4
SNED1-202ENST00000342631 NAA15Q9BXJ9 866 aaKnown RBP17.58■□□□□ 0.4
SNED1-202ENST00000342631 STK33Q9BYT3 514 aa17.58■□□□□ 0.4
SNED1-202ENST00000342631 MTIF3Q9H2K0 278 aaKnown RBP17.58■□□□□ 0.4
SNED1-202ENST00000342631 POMCP01189 267 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 AFF1P51825 1210 aaKnown RBP17.57■□□□□ 0.4
SNED1-202ENST00000342631 SOX4Q06945 474 aaPredicted RBP17.57■□□□□ 0.4
SNED1-202ENST00000342631 ARID5BQ14865 1188 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 ZNF667Q5HYK9 610 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 TMEM240Q5SV17 173 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 ZNF365Q70YC5 407 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 CASD1Q96PB1 797 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 UBE2TQ9NPD8 197 aaPredicted RBP17.57■□□□□ 0.4
SNED1-202ENST00000342631 DNAJC12Q9UKB3 198 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 ZMYND8Q9ULU4 1186 aaPredicted RBP17.57■□□□□ 0.4
SNED1-202ENST00000342631 RBAK-RBAKDNI3L0D1 243 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 EPHB6O15197 1021 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 MFAP3LO75121 409 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 DGKIO75912 1065 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 SYN1P17600 705 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 GUCY2FP51841 1108 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 DSC1Q08554 894 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 PPM1KQ8N3J5 372 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 HERVK_113Q902F9 699 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 SYN2Q92777 582 aaPredicted RBP17.57■□□□□ 0.4
SNED1-202ENST00000342631 FAM193BQ96PV7 902 aaPredicted RBP17.57■□□□□ 0.4
SNED1-202ENST00000342631 PI4K2AQ9BTU6 479 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 NIF3L1Q9GZT8 377 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 TBC1D13Q9NVG8 400 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 FHOD1Q9Y613 1164 aa17.57■□□□□ 0.4
SNED1-202ENST00000342631 FNDC1Q4ZHG4 1894 aaPredicted RBP17.56■□□□□ 0.4
SNED1-202ENST00000342631 MKI67P46013 3256 aaKnown RBP17.56■□□□□ 0.4
SNED1-202ENST00000342631 CARNS1A5YM72 827 aa17.56■□□□□ 0.4
SNED1-202ENST00000342631 KRT9P35527 623 aa17.56■□□□□ 0.4
SNED1-202ENST00000342631 FXR1P51114 621 aaKnown RBP eCLIP17.56■□□□□ 0.4
SNED1-202ENST00000342631 RNASELQ05823 741 aaKnown RBP17.56■□□□□ 0.4
SNED1-202ENST00000342631 LRMPQ12912 555 aa17.56■□□□□ 0.4
SNED1-202ENST00000342631 TSR1Q2NL82 804 aaKnown RBP17.56■□□□□ 0.4
SNED1-202ENST00000342631 SV2CQ496J9 727 aa17.56■□□□□ 0.4
SNED1-202ENST00000342631 IQCEQ6IPM2 695 aa17.56■□□□□ 0.4
SNED1-202ENST00000342631 OTOP2Q7RTS6 562 aa17.56■□□□□ 0.4
SNED1-202ENST00000342631 CPLX3Q8WVH0 158 aa17.56■□□□□ 0.4
SNED1-202ENST00000342631 SPAG5Q96R06 1193 aa17.56■□□□□ 0.4
SNED1-202ENST00000342631 LRRN2O75325 713 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 PTMAP06454 111 aaKnown RBP17.55■□□□□ 0.4
SNED1-202ENST00000342631 TAF6P49848 677 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 YWHAEP62258 255 aaKnown RBP17.55■□□□□ 0.4
SNED1-202ENST00000342631 CUL2Q13617 745 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 UPP1Q16831 310 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 WDR72Q3MJ13 1102 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 CCDC186Q7Z3E2 898 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 ARHGEF19Q8IW93 802 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 LRRC43Q8N309 656 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 TTC39CQ8N584 583 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 OR8K1Q8NGG5 319 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 PHOSPHO2Q8TCD6 241 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 BAP1Q92560 729 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 TATDN2Q93075 761 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 PANX2Q96RD6 677 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 DNAJC7Q99615 494 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.55■□□□□ 0.4
SNED1-202ENST00000342631 APOBEC3GQ9HC16 384 aaKnown RBP17.55■□□□□ 0.4
SNED1-202ENST00000342631 NUB1Q9Y5A7 615 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 TBKBP1A7MCY6 615 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 PODXLO00592 558 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 JAM2P57087 298 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 APBA1Q02410 837 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 TC2NQ8N9U0 490 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 ZNF689Q96CS4 500 aaPredicted RBP17.55■□□□□ 0.4
SNED1-202ENST00000342631 SLC9A7Q96T83 725 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 CYP3A43Q9HB55 503 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 GOLGA2P5Q9HBQ8 144 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 NLRC4Q9NPP4 1024 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 GDAP2Q9NXN4 497 aa17.55■□□□□ 0.4
SNED1-202ENST00000342631 CLSTN1O94985 981 aa17.54■□□□□ 0.4
SNED1-202ENST00000342631 UPP2O95045 317 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms