RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 WDR60Q8WVS4 1066 aa16.29■□□□□ 0.2
LIMK2-203ENST00000340552 DDX12PQ92771 950 aa16.29■□□□□ 0.2
LIMK2-203ENST00000340552 LENG1Q96BZ8 264 aaPredicted RBP16.29■□□□□ 0.2
LIMK2-203ENST00000340552 PTPN22Q9Y2R2 807 aa16.29■□□□□ 0.2
LIMK2-203ENST00000340552 ATP8B3O60423 1300 aa16.29■□□□□ 0.2
LIMK2-203ENST00000340552 POTEMA6NI47 508 aa16.29■□□□□ 0.2
LIMK2-203ENST00000340552 FZD9O00144 591 aa16.29■□□□□ 0.2
LIMK2-203ENST00000340552 CD151P48509 253 aa16.29■□□□□ 0.2
LIMK2-203ENST00000340552 TTLL12Q14166 644 aaPredicted RBP16.29■□□□□ 0.2
LIMK2-203ENST00000340552 P3H1Q32P28 736 aa16.29■□□□□ 0.2
LIMK2-203ENST00000340552 FOXR2Q6PJQ5 311 aa16.29■□□□□ 0.2
LIMK2-203ENST00000340552 MARK2Q7KZI7 788 aaKnown RBP16.29■□□□□ 0.2
LIMK2-203ENST00000340552 SMC1BQ8NDV3 1235 aa16.29■□□□□ 0.2
LIMK2-203ENST00000340552 NLGN2Q8NFZ4 835 aa16.29■□□□□ 0.2
LIMK2-203ENST00000340552 NAP1L4Q99733 375 aaKnown RBP16.29■□□□□ 0.2
LIMK2-203ENST00000340552 GLIS2Q9BZE0 524 aaPredicted RBP16.29■□□□□ 0.2
LIMK2-203ENST00000340552 RMI1Q9H9A7 625 aa16.29■□□□□ 0.2
LIMK2-203ENST00000340552 ADGRA3Q8IWK6 1321 aa16.29■□□□□ 0.2
LIMK2-203ENST00000340552 MARCH6O60337 910 aa16.28■□□□□ 0.2
LIMK2-203ENST00000340552 MARSP56192 900 aaKnown RBP16.28■□□□□ 0.2
LIMK2-203ENST00000340552 IL9RQ01113 521 aa16.28■□□□□ 0.2
LIMK2-203ENST00000340552 CTC1Q2NKJ3 1217 aa16.28■□□□□ 0.2
LIMK2-203ENST00000340552 TBC1D10BQ4KMP7 808 aaPredicted RBP16.28■□□□□ 0.2
LIMK2-203ENST00000340552 SPATA24Q86W54 205 aa16.28■□□□□ 0.2
LIMK2-203ENST00000340552 HAS1Q92839 578 aa16.28■□□□□ 0.2
LIMK2-203ENST00000340552 CEP63Q96MT8 703 aa16.28■□□□□ 0.2
LIMK2-203ENST00000340552 TEPSINQ96N21 525 aa16.28■□□□□ 0.2
LIMK2-203ENST00000340552 ZFP69BQ9UJL9 534 aa16.28■□□□□ 0.2
LIMK2-203ENST00000340552 EXOC3O60645 756 aa16.28■□□□□ 0.2
LIMK2-203ENST00000340552 CTTNQ14247 550 aaKnown RBP16.28■□□□□ 0.2
LIMK2-203ENST00000340552 TMEM63BQ5T3F8 832 aa16.28■□□□□ 0.2
LIMK2-203ENST00000340552 PPP1R21Q6ZMI0 780 aa16.28■□□□□ 0.2
LIMK2-203ENST00000340552 RIBC1Q8N443 379 aaPredicted RBP16.28■□□□□ 0.2
LIMK2-203ENST00000340552 LNX1Q8TBB1 728 aaPredicted RBP16.28■□□□□ 0.2
LIMK2-203ENST00000340552 DDX27Q96GQ7 796 aaKnown RBP16.28■□□□□ 0.2
LIMK2-203ENST00000340552 AGBL1Q96MI9 1066 aa16.28■□□□□ 0.2
LIMK2-203ENST00000340552 P2RX7Q99572 595 aaKnown RBP16.28■□□□□ 0.2
LIMK2-203ENST00000340552 CCDC28BQ9BUN5 200 aa16.28■□□□□ 0.2
LIMK2-203ENST00000340552 TBC1D7Q9P0N9 293 aa16.28■□□□□ 0.2
LIMK2-203ENST00000340552 NCANO14594 1321 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 ASTN2O75129 1339 aaPredicted RBP16.27■□□□□ 0.2
LIMK2-203ENST00000340552 UMODL1Q5DID0 1318 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.27■□□□□ 0.2
LIMK2-203ENST00000340552 TP73O15350 636 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 MAGEB2O15479 319 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 ABCB4P21439 1286 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 EIF4BP23588 611 aaKnown RBP16.27■□□□□ 0.2
LIMK2-203ENST00000340552 CHKAP35790 457 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 OLFML2BQ68BL8 750 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 KSR1Q8IVT5 923 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 OLIG1Q8TAK6 271 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 CHURC1Q8WUH1 139 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 RFFLQ8WZ73 363 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 SYNCQ9H7C4 482 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 DNAJC17Q9NVM6 304 aaKnown RBP16.27■□□□□ 0.2
LIMK2-203ENST00000340552 ZNF212Q9UDV6 495 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 CIDEBQ9UHD4 219 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 A0A0J9YVX5 310 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 POTEFA5A3E0 1075 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 GSC2O15499 205 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 POTEIP0CG38 1075 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 POTEJP0CG39 1038 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 VAV1P15498 845 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 CTNNA2P26232 953 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 POTEEQ6S8J3 1075 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 KCNK18Q7Z418 384 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 GJA10Q969M2 543 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 POP1Q99575 1024 aaKnown RBP16.27■□□□□ 0.2
LIMK2-203ENST00000340552 MAF1Q9H063 256 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 MIS12Q9H081 205 aa16.27■□□□□ 0.2
LIMK2-203ENST00000340552 TMEM221A6NGB7 291 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 ZNF189O75820 626 aaPredicted RBP16.26■□□□□ 0.19
LIMK2-203ENST00000340552 ASMTLO95671 621 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 KCNJ1P48048 391 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 MARCKSL1P49006 195 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 COASYQ13057 564 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 DUS1LQ6P1R4 473 aaKnown RBP16.26■□□□□ 0.19
LIMK2-203ENST00000340552 MTDHQ86UE4 582 aaKnown RBP16.26■□□□□ 0.19
LIMK2-203ENST00000340552 LZICQ8WZA0 190 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 CDK5RAP3Q96JB5 506 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 MPP4Q96JB8 637 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 STK17AQ9UEE5 414 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 HACL1Q9UJ83 578 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 NAALADL1Q9UQQ1 740 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 EDF1O60869 148 aaKnown RBP16.26■□□□□ 0.19
LIMK2-203ENST00000340552 FOSP01100 380 aaPredicted RBP16.26■□□□□ 0.19
LIMK2-203ENST00000340552 PABPC4LP0CB38 370 aaKnown RBP16.26■□□□□ 0.19
LIMK2-203ENST00000340552 PON1P27169 355 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 ARHGAP4P98171 946 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 PLOD1Q02809 727 aaPredicted RBP16.26■□□□□ 0.19
LIMK2-203ENST00000340552 PPP2R5CQ13362 524 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 KYNUQ16719 465 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 DAB2IPQ5VWQ8 1189 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 KRT79Q5XKE5 535 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 GJB7Q6PEY0 223 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 IZUMO2Q6UXV1 221 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 EPM2AIP1Q7L775 607 aaPredicted RBP16.26■□□□□ 0.19
LIMK2-203ENST00000340552 CLNKQ7Z7G1 428 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 VPS36Q86VN1 386 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 SNX29Q8TEQ0 813 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms