RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 AP1B1Q10567 949 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 NOMO2Q5JPE7 1267 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 FBXO47Q5MNV8 452 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 CCDC149Q6ZUS6 474 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 LRRC8DQ7L1W4 858 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 OTOP1Q7RTM1 612 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 CCDC60Q8IWA6 550 aaPredicted RBP13.58□□□□□ -0.24
LIN54-201ENST00000340417 ATP6V0D2Q8N8Y2 350 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 GAD1Q99259 594 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 NUP85Q9BW27 656 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 C10orf71Q711Q0 1435 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 KRT7P08729 469 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 KRT3P12035 628 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 SP100P23497 879 aaPredicted RBP13.57□□□□□ -0.24
LIN54-201ENST00000340417 DRP2Q13474 957 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 PLPPR4Q7Z2D5 763 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 USP38Q8NB14 1042 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 SNX19Q92543 992 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 PI4K2AQ9BTU6 479 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 SMYD2Q9NRG4 433 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 SLC10A3P09131 477 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 ACADMP11310 421 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 PAMP19021 973 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 BTNL9Q6UXG8 535 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 FBXO22Q8NEZ5 403 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 TSC1Q92574 1164 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 APBB2Q92870 758 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 LRRC53A6NM62 1247 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 SPATA31C2B4DYI2 1134 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 PTGER2P43116 358 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 EVCP57679 992 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 PDE1BQ01064 536 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 HHATQ5VTY9 493 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 PPP2R2DQ66LE6 453 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 APEX2Q9UBZ4 518 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 NFASCO94856 1347 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 PRR23AA6NEV1 266 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 GARTP22102 1010 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 EIF4BP23588 611 aaKnown RBP13.57□□□□□ -0.24
LIN54-201ENST00000340417 DCAF6Q58WW2 860 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 TTC23LQ6PF05 361 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 MIB1Q86YT6 1006 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 PGLYRP2Q96PD5 576 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 AGPAT3Q9NRZ7 376 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 HOMER3Q9NSC5 361 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 WDR35Q9P2L0 1181 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 COL16A1Q07092 1604 aaPredicted RBP13.57□□□□□ -0.24
LIN54-201ENST00000340417 FTLP02792 175 aaPredicted RBP13.57□□□□□ -0.24
LIN54-201ENST00000340417 CRYBB1P53674 252 aaPredicted RBP13.57□□□□□ -0.24
LIN54-201ENST00000340417 EFHC1Q5JVL4 640 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 MICALCLQ6ZW33 695 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 SMC6Q96SB8 1091 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 TLE6Q9H808 572 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 ST3GAL5Q9UNP4 418 aa13.57□□□□□ -0.24
LIN54-201ENST00000340417 RHOBTB3O94955 611 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 FTCDO95954 541 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 CYP3A4P08684 503 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 ATXN3P54252 364 aaPredicted RBP13.56□□□□□ -0.24
LIN54-201ENST00000340417 IQCB1Q15051 598 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 RAB44Q7Z6P3 723 aaPredicted RBP13.56□□□□□ -0.24
LIN54-201ENST00000340417 ZNF564Q8TBZ8 553 aaPredicted RBP13.56□□□□□ -0.24
LIN54-201ENST00000340417 DDX43Q9NXZ2 648 aaKnown RBP13.56□□□□□ -0.24
LIN54-201ENST00000340417 RAB23Q9ULC3 237 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 TMEM150BA6NC51 233 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 SMIM22K7EJ46 135 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 PODXLO00592 558 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 PDGFRAP16234 1089 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 WEE1P30291 646 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 MLH1P40692 756 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 RARRES1P49788 294 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 GTF2H3Q13889 308 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 EDRF1Q3B7T1 1238 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 ACOT1Q86TX2 421 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 ACSF2Q96CM8 615 aaPredicted RBP13.56□□□□□ -0.24
LIN54-201ENST00000340417 PRIMPOLQ96LW4 560 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 ACKR2O00590 384 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 ADH1AP07327 375 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 SCNN1GP51170 649 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 PKN1Q16512 942 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 MDH1BQ5I0G3 518 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 CROCCP2Q86T23 111 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 LENG1Q96BZ8 264 aaPredicted RBP13.56□□□□□ -0.24
LIN54-201ENST00000340417 ZBTB9Q96C00 473 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 PCDHB2Q9Y5E7 798 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 ZRANB2O95218 330 aaKnown RBP eCLIP13.56□□□□□ -0.24
LIN54-201ENST00000340417 STK4Q13043 487 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 CCL14Q16627 93 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 ARNTL2Q8WYA1 636 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 RIPK3Q9Y572 518 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 UBIAD1Q9Y5Z9 338 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 RTP1P59025 263 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 PREPLQ4J6C6 727 aaPredicted RBP13.56□□□□□ -0.24
LIN54-201ENST00000340417 SEZ6LQ9BYH1 1024 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 KRT82Q9NSB4 513 aa13.56□□□□□ -0.24
LIN54-201ENST00000340417 UXTQ9UBK9 157 aaPredicted RBP13.56□□□□□ -0.24
LIN54-201ENST00000340417 DIS3Q9Y2L1 958 aaKnown RBP13.56□□□□□ -0.24
LIN54-201ENST00000340417 BUB1BO60566 1050 aaPredicted RBP13.55□□□□□ -0.24
LIN54-201ENST00000340417 GUCY2CP25092 1073 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 PLPP4Q5VZY2 271 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 PSRC1Q6PGN9 363 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms