RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 PRCPP42785 496 aa16.51■□□□□ 0.23
UBE3B-201ENST00000340074 NDUFV1P49821 464 aa16.51■□□□□ 0.23
UBE3B-201ENST00000340074 CAMK4Q16566 473 aa16.51■□□□□ 0.23
UBE3B-201ENST00000340074 C9orf57Q5W0N0 161 aa16.51■□□□□ 0.23
UBE3B-201ENST00000340074 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.51■□□□□ 0.23
UBE3B-201ENST00000340074 SLC9A9Q8IVB4 645 aa16.51■□□□□ 0.23
UBE3B-201ENST00000340074 GPR65Q8IYL9 337 aa16.51■□□□□ 0.23
UBE3B-201ENST00000340074 ATXN2LQ8WWM7 1075 aaKnown RBP16.51■□□□□ 0.23
UBE3B-201ENST00000340074 FAM84AQ96KN4 292 aa16.51■□□□□ 0.23
UBE3B-201ENST00000340074 RXFP1Q9HBX9 757 aa16.51■□□□□ 0.23
UBE3B-201ENST00000340074 DMAC2Q9NW81 257 aa16.51■□□□□ 0.23
UBE3B-201ENST00000340074 MAN1B1Q9UKM7 699 aa16.51■□□□□ 0.23
UBE3B-201ENST00000340074 BARX2Q9UMQ3 279 aaPredicted RBP16.51■□□□□ 0.23
UBE3B-201ENST00000340074 TRAF3IP3Q9Y228 551 aa16.51■□□□□ 0.23
UBE3B-201ENST00000340074 HCFC2Q9Y5Z7 792 aa16.51■□□□□ 0.23
UBE3B-201ENST00000340074 ANO9A1A5B4 782 aa16.5■□□□□ 0.23
UBE3B-201ENST00000340074 PIRO00625 290 aa16.5■□□□□ 0.23
UBE3B-201ENST00000340074 TEX28O15482 410 aa16.5■□□□□ 0.23
UBE3B-201ENST00000340074 CALUO43852 315 aaPredicted RBP16.5■□□□□ 0.23
UBE3B-201ENST00000340074 RPL17P18621 184 aaKnown RBP16.5■□□□□ 0.23
UBE3B-201ENST00000340074 KLRC2P26717 231 aa16.5■□□□□ 0.23
UBE3B-201ENST00000340074 MRPS5P82675 430 aaKnown RBP16.5■□□□□ 0.23
UBE3B-201ENST00000340074 CYP24A1Q07973 514 aa16.5■□□□□ 0.23
UBE3B-201ENST00000340074 LMBRD2Q68DH5 695 aaPredicted RBP16.5■□□□□ 0.23
UBE3B-201ENST00000340074 GLYCTKQ8IVS8 523 aa16.5■□□□□ 0.23
UBE3B-201ENST00000340074 LNX1Q8TBB1 728 aaPredicted RBP16.5■□□□□ 0.23
UBE3B-201ENST00000340074 CACTINQ8WUQ7 758 aaKnown RBP16.5■□□□□ 0.23
UBE3B-201ENST00000340074 TMEM174Q8WUU8 243 aa16.5■□□□□ 0.23
UBE3B-201ENST00000340074 PIK3R5Q8WYR1 880 aa16.5■□□□□ 0.23
UBE3B-201ENST00000340074 SUSD3Q96L08 255 aa16.5■□□□□ 0.23
UBE3B-201ENST00000340074 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.5■□□□□ 0.23
UBE3B-201ENST00000340074 CLEC1BQ9P126 229 aa16.5■□□□□ 0.23
UBE3B-201ENST00000340074 C2orf16Q68DN1 1984 aa16.5■□□□□ 0.23
UBE3B-201ENST00000340074 PTPRJQ12913 1337 aa16.5■□□□□ 0.23
UBE3B-201ENST00000340074 ADH1AP07327 375 aa16.49■□□□□ 0.23
UBE3B-201ENST00000340074 CASP4P49662 377 aa16.49■□□□□ 0.23
UBE3B-201ENST00000340074 KCNQ1P51787 676 aa16.49■□□□□ 0.23
UBE3B-201ENST00000340074 CLCN4P51793 760 aa16.49■□□□□ 0.23
UBE3B-201ENST00000340074 LILRA4P59901 499 aa16.49■□□□□ 0.23
UBE3B-201ENST00000340074 SURF1Q15526 300 aa16.49■□□□□ 0.23
UBE3B-201ENST00000340074 CLUL1Q15846 466 aa16.49■□□□□ 0.23
UBE3B-201ENST00000340074 PSMD5Q16401 504 aa16.49■□□□□ 0.23
UBE3B-201ENST00000340074 AAK1Q2M2I8 961 aa16.49■□□□□ 0.23
UBE3B-201ENST00000340074 COBLL1Q53SF7 1204 aa16.49■□□□□ 0.23
UBE3B-201ENST00000340074 TMEM184AQ6ZMB5 413 aa16.49■□□□□ 0.23
UBE3B-201ENST00000340074 PPFIBP1Q86W92 1011 aa16.49■□□□□ 0.23
UBE3B-201ENST00000340074 SLC22A17Q8WUG5 538 aa16.49■□□□□ 0.23
UBE3B-201ENST00000340074 ASB2Q96Q27 587 aa16.49■□□□□ 0.23
UBE3B-201ENST00000340074 MTMR12Q9C0I1 747 aa16.49■□□□□ 0.23
UBE3B-201ENST00000340074 FNIP2Q9P278 1114 aa16.49■□□□□ 0.23
UBE3B-201ENST00000340074 BIN1O00499 593 aa16.48■□□□□ 0.23
UBE3B-201ENST00000340074 SYN3O14994 580 aa16.48■□□□□ 0.23
UBE3B-201ENST00000340074 TMEM191BP0C7N4 346 aa16.48■□□□□ 0.23
UBE3B-201ENST00000340074 DLATP10515 647 aaKnown RBP16.48■□□□□ 0.23
UBE3B-201ENST00000340074 EPCAMP16422 314 aa16.48■□□□□ 0.23
UBE3B-201ENST00000340074 AARSP49588 968 aaKnown RBP eCLIP16.48■□□□□ 0.23
UBE3B-201ENST00000340074 MYBPC2Q14324 1141 aa16.48■□□□□ 0.23
UBE3B-201ENST00000340074 PSMD6Q15008 389 aa16.48■□□□□ 0.23
UBE3B-201ENST00000340074 LEXMQ3ZCV2 418 aa16.48■□□□□ 0.23
UBE3B-201ENST00000340074 ZCWPW2Q504Y3 356 aa16.48■□□□□ 0.23
UBE3B-201ENST00000340074 CEP135Q66GS9 1140 aa16.48■□□□□ 0.23
UBE3B-201ENST00000340074 PDXDC1Q6P996 788 aa16.48■□□□□ 0.23
UBE3B-201ENST00000340074 C1orf127Q8N9H9 656 aa16.48■□□□□ 0.23
UBE3B-201ENST00000340074 OR5B17Q8NGF7 314 aa16.48■□□□□ 0.23
UBE3B-201ENST00000340074 CASP10Q92851 521 aa16.48■□□□□ 0.23
UBE3B-201ENST00000340074 CCDC127Q96BQ5 260 aa16.48■□□□□ 0.23
UBE3B-201ENST00000340074 MSLNLQ96KJ4 702 aa16.48■□□□□ 0.23
UBE3B-201ENST00000340074 MFSD14AQ96MC6 490 aa16.48■□□□□ 0.23
UBE3B-201ENST00000340074 POP1Q99575 1024 aaKnown RBP16.48■□□□□ 0.23
UBE3B-201ENST00000340074 GTPBP4Q9BZE4 634 aaKnown RBP16.48■□□□□ 0.23
UBE3B-201ENST00000340074 INTS13Q9NVM9 706 aa16.48■□□□□ 0.23
UBE3B-201ENST00000340074 M0QZQ0 153 aa16.47■□□□□ 0.23
UBE3B-201ENST00000340074 SPTLC1O15269 473 aa16.47■□□□□ 0.23
UBE3B-201ENST00000340074 ITGB3P05106 788 aa16.47■□□□□ 0.23
UBE3B-201ENST00000340074 SRGAP2BP0DMP2 458 aa16.47■□□□□ 0.23
UBE3B-201ENST00000340074 BMP6P22004 513 aa16.47■□□□□ 0.23
UBE3B-201ENST00000340074 NR2F2P24468 414 aa16.47■□□□□ 0.23
UBE3B-201ENST00000340074 POLR2BP30876 1174 aaKnown RBP16.47■□□□□ 0.23
UBE3B-201ENST00000340074 CREMQ03060 361 aa16.47■□□□□ 0.23
UBE3B-201ENST00000340074 NFIL3Q16649 462 aa16.47■□□□□ 0.23
UBE3B-201ENST00000340074 VARS2Q5ST30 1063 aaKnown RBP16.47■□□□□ 0.23
UBE3B-201ENST00000340074 SCARA3Q6AZY7 606 aa16.47■□□□□ 0.23
UBE3B-201ENST00000340074 DSTYKQ6XUX3 929 aa16.47■□□□□ 0.23
UBE3B-201ENST00000340074 PALB2Q86YC2 1186 aa16.47■□□□□ 0.23
UBE3B-201ENST00000340074 WDR49Q8IV35 697 aa16.47■□□□□ 0.23
UBE3B-201ENST00000340074 ADSSL1Q8N142 457 aa16.47■□□□□ 0.23
UBE3B-201ENST00000340074 CSGALNACT2Q8N6G5 542 aa16.47■□□□□ 0.23
UBE3B-201ENST00000340074 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.47■□□□□ 0.23
UBE3B-201ENST00000340074 ANKRD36BP1Q96IX9 119 aa16.47■□□□□ 0.23
UBE3B-201ENST00000340074 FNBP1Q96RU3 617 aa16.47■□□□□ 0.23
UBE3B-201ENST00000340074 CLSTN3Q9BQT9 956 aa16.47■□□□□ 0.23
UBE3B-201ENST00000340074 GZF1Q9H116 711 aaPredicted RBP16.47■□□□□ 0.23
UBE3B-201ENST00000340074 PCDHB8Q9UN66 801 aa16.47■□□□□ 0.23
UBE3B-201ENST00000340074 GOLGA6L22H0YM25 854 aa16.46■□□□□ 0.23
UBE3B-201ENST00000340074 ADAM12O43184 909 aa16.46■□□□□ 0.23
UBE3B-201ENST00000340074 TNNI1P19237 187 aa16.46■□□□□ 0.23
UBE3B-201ENST00000340074 MORC3Q14149 939 aa16.46■□□□□ 0.23
UBE3B-201ENST00000340074 DUOXA2Q1HG44 320 aa16.46■□□□□ 0.23
UBE3B-201ENST00000340074 CENPPQ6IPU0 288 aa16.46■□□□□ 0.23
UBE3B-201ENST00000340074 ANKRD54Q6NXT1 300 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms