RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 DARSP14868 501 aaKnown RBP13.43□□□□□ -0.26
USP47-202ENST00000339865 BCAR1P56945 870 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 KIAA0408Q6ZU52 694 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 COMMD2Q86X83 199 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 PPP1R14BQ96C90 147 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 PCMTD2Q9NV79 361 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 GALNT8Q9NY28 637 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 PPP1R37O75864 691 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 BAIAP3O94812 1187 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 FTLP02792 175 aaPredicted RBP13.43□□□□□ -0.26
USP47-202ENST00000339865 ZNF746Q6NUN9 644 aaPredicted RBP13.43□□□□□ -0.26
USP47-202ENST00000339865 LPCAT2Q7L5N7 544 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 KRCC1Q9NPI7 259 aaPredicted RBP13.43□□□□□ -0.26
USP47-202ENST00000339865 GDAQ9Y2T3 454 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 PPIP5K1Q6PFW1 1433 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 MYH8P13535 1937 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 F8W810 466 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 PRIM2P49643 509 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 NUDT18Q6ZVK8 323 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 DNAJC12Q9UKB3 198 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 ERBB3P21860 1342 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 TIAM1Q13009 1591 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 EIF3HO15372 352 aaKnown RBP eCLIP13.43□□□□□ -0.26
USP47-202ENST00000339865 HIST1H2AGP0C0S8 130 aaPredicted RBP13.43□□□□□ -0.26
USP47-202ENST00000339865 HIST1H2ADP20671 130 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 CCSAPQ6IQ19 270 aaPredicted RBP13.43□□□□□ -0.26
USP47-202ENST00000339865 PID1Q7Z2X4 250 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 SUCLG2Q96I99 432 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 HIST1H2AHQ96KK5 128 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 HIST1H2AJQ99878 128 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 H2AFJQ9BTM1 129 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 MLPHQ9BV36 600 aaPredicted RBP13.43□□□□□ -0.26
USP47-202ENST00000339865 POLD4Q9HCU8 107 aa13.43□□□□□ -0.26
USP47-202ENST00000339865 AKT1P31749 480 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 HSPA13P48723 471 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 RBBP4Q09028 425 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 GRSF1Q12849 480 aaKnown RBP eCLIP13.42□□□□□ -0.26
USP47-202ENST00000339865 ITPRIPL1Q6GPH6 555 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 DSEQ9UL01 958 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 NDUFS3O75489 264 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 LPIN1Q14693 890 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 LLGL2Q6P1M3 1020 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 TRIM51Q9BSJ1 452 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 DDX18Q9NVP1 670 aaKnown RBP13.42□□□□□ -0.26
USP47-202ENST00000339865 PITPNM2Q9BZ72 1349 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 GNA15P30679 374 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 HNRNPH1P31943 449 aaKnown RBP13.42□□□□□ -0.26
USP47-202ENST00000339865 EIF3EP60228 445 aaKnown RBP13.42□□□□□ -0.26
USP47-202ENST00000339865 ARF3P61204 181 aaPredicted RBP13.42□□□□□ -0.26
USP47-202ENST00000339865 ARF1P84077 181 aaKnown RBP13.42□□□□□ -0.26
USP47-202ENST00000339865 IRAK1BP1Q5VVH5 260 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 OSBPL6Q9BZF3 934 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 ADGRF5Q8IZF2 1346 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 APOL1O14791 398 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 AREL1O15033 823 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 CLDN3O15551 220 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 CDH6P55285 790 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 KCNK10P57789 538 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
USP47-202ENST00000339865 ARHGAP22Q7Z5H3 698 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 TMEM35BQ8NCS4 154 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 CCSER1Q9C0I3 900 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 IP6K2Q9UHH9 426 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 SNTNA6NMZ2 147 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 RRM2P31350 389 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 GPR1P46091 355 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 ZNF235Q14590 738 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 ZNF790Q6PG37 636 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 UTS2BQ765I0 119 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 MOSPD2Q8NHP6 518 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 STARP49675 285 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 BTN3A2P78410 334 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 PTPN12Q05209 780 aaKnown RBP13.42□□□□□ -0.26
USP47-202ENST00000339865 STAT4Q14765 748 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 PIGOQ8TEQ8 1089 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 ENTPD7Q9NQZ7 604 aa13.42□□□□□ -0.26
USP47-202ENST00000339865 PTPRN2Q92932 1015 aa13.41□□□□□ -0.26
USP47-202ENST00000339865 SLC40A1Q9NP59 571 aa13.41□□□□□ -0.26
USP47-202ENST00000339865 XPO7Q9UIA9 1087 aaKnown RBP13.41□□□□□ -0.26
USP47-202ENST00000339865 FAM47DPA6NHR8 397 aa13.41□□□□□ -0.26
USP47-202ENST00000339865 CNOT3O75175 753 aaKnown RBP13.41□□□□□ -0.26
USP47-202ENST00000339865 IGFBP4P22692 258 aa13.41□□□□□ -0.26
USP47-202ENST00000339865 QARSP47897 775 aaKnown RBP13.41□□□□□ -0.26
USP47-202ENST00000339865 CDC16Q13042 620 aa13.41□□□□□ -0.26
USP47-202ENST00000339865 C4orf33Q8N1A6 199 aa13.41□□□□□ -0.26
USP47-202ENST00000339865 C18orf25Q96B23 403 aaPredicted RBP13.41□□□□□ -0.26
USP47-202ENST00000339865 PACSIN1Q9BY11 444 aa13.41□□□□□ -0.26
USP47-202ENST00000339865 SCUBE2Q9NQ36 999 aa13.41□□□□□ -0.26
USP47-202ENST00000339865 IL1RAPL1Q9NZN1 696 aa13.41□□□□□ -0.26
USP47-202ENST00000339865 SMG5Q9UPR3 1016 aaKnown RBP13.41□□□□□ -0.26
USP47-202ENST00000339865 ATP5JP18859 108 aa13.41□□□□□ -0.26
USP47-202ENST00000339865 EIF2S3P41091 472 aaKnown RBP13.41□□□□□ -0.26
USP47-202ENST00000339865 DCAF15Q66K64 600 aa13.41□□□□□ -0.26
USP47-202ENST00000339865 FOXR1Q6PIV2 292 aa13.41□□□□□ -0.26
USP47-202ENST00000339865 EPHX4Q8IUS5 362 aa13.41□□□□□ -0.26
USP47-202ENST00000339865 CACTIN-AS1Q8N1I8 211 aa13.41□□□□□ -0.26
USP47-202ENST00000339865 NSL1Q96IY1 281 aa13.41□□□□□ -0.26
USP47-202ENST00000339865 SHCBP1LQ9BZQ2 653 aa13.41□□□□□ -0.26
USP47-202ENST00000339865 MTO1Q9Y2Z2 717 aaKnown RBP13.41□□□□□ -0.26
USP47-202ENST00000339865 SH3GLB1Q9Y371 365 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms