RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 C1orf127Q8N9H9 656 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 OR5B17Q8NGF7 314 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 CACTINQ8WUQ7 758 aaKnown RBP13.9□□□□□ -0.19
SRSF3-201ENST00000339436 AUTS2Q8WXX7 1259 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 CCDC127Q96BQ5 260 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 B3GALT6Q96L58 329 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 FNBP1Q96RU3 617 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 CGRRF1Q99675 332 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 INTS13Q9NVM9 706 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 CTNND2Q9UQB3 1225 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 NUB1Q9Y5A7 615 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 I3L4J1 428 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 TULP1O00294 542 aaPredicted RBP13.89□□□□□ -0.19
SRSF3-201ENST00000339436 PIRO00625 290 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 TRAPPC3O43617 180 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 FGFR3P22607 806 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 BRCC3P46736 316 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 HYAL1Q12794 435 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 PAK1Q13153 545 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 ADAM9Q13443 819 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 COL19A1Q14993 1142 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 RTP2Q5QGT7 225 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 ANKRD40Q6AI12 368 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 TTI2Q6NXR4 508 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 GPR65Q8IYL9 337 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 CXorf38Q8TB03 319 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 PLEKHO2Q8TD55 490 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 NELFBQ8WX92 580 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 ANKRD36BP1Q96IX9 119 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 MKNK1Q9BUB5 465 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 MRPL17Q9NRX2 175 aaKnown RBP13.89□□□□□ -0.19
SRSF3-201ENST00000339436 ITGA11Q9UKX5 1188 aa13.89□□□□□ -0.19
SRSF3-201ENST00000339436 C2orf16Q68DN1 1984 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 BICDL2A1A5D9 508 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 C2CD2LO14523 706 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 CETN3O15182 167 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 LILRB3O75022 631 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 TNNC2P02585 160 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 ITGB3P05106 788 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 TNNI1P19237 187 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 TKTP29401 623 aaKnown RBP13.88□□□□□ -0.19
SRSF3-201ENST00000339436 POLR2BP30876 1174 aaKnown RBP13.88□□□□□ -0.19
SRSF3-201ENST00000339436 CA8P35219 290 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 PSMC2P35998 433 aaKnown RBP13.88□□□□□ -0.19
SRSF3-201ENST00000339436 NRIP1P48552 1158 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 CLDN10P78369 228 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 FKBP3Q00688 224 aaKnown RBP13.88□□□□□ -0.19
SRSF3-201ENST00000339436 DUSP6Q16828 381 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 DUOXA2Q1HG44 320 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 DPCR1Q3MIW9 517 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 CCDC183Q5T5S1 534 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 KIAA0319Q5VV43 1072 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 KIAA1841Q6NSI8 718 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 FAM186BQ8IYM0 893 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 PARD3BQ8TEW8 1205 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 PPM1EQ8WY54 764 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 EEF2KMTQ96G04 330 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 SUSD3Q96L08 255 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 ZNF560Q96MR9 790 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 POP1Q99575 1024 aaKnown RBP13.88□□□□□ -0.19
SRSF3-201ENST00000339436 TTPALQ9BTX7 342 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 TLE6Q9H808 572 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 SIX4Q9UIU6 781 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 SSX2IPQ9Y2D8 614 aa13.88□□□□□ -0.19
SRSF3-201ENST00000339436 FSD2A1L4K1 749 aa13.87□□□□□ -0.19
SRSF3-201ENST00000339436 LRRIQ3A6PVS8 624 aaPredicted RBP13.87□□□□□ -0.19
SRSF3-201ENST00000339436 SYN3O14994 580 aa13.87□□□□□ -0.19
SRSF3-201ENST00000339436 SLC16A3O15427 465 aaKnown RBP13.87□□□□□ -0.19
SRSF3-201ENST00000339436 CXCL14O95715 111 aa13.87□□□□□ -0.19
SRSF3-201ENST00000339436 EPB41P11171 864 aaKnown RBP13.87□□□□□ -0.19
SRSF3-201ENST00000339436 GTF2F1P35269 517 aaKnown RBP eCLIP13.87□□□□□ -0.19
SRSF3-201ENST00000339436 LILRA4P59901 499 aa13.87□□□□□ -0.19
SRSF3-201ENST00000339436 ENPEPQ07075 957 aa13.87□□□□□ -0.19
SRSF3-201ENST00000339436 INTS8Q75QN2 995 aaKnown RBP13.87□□□□□ -0.19
SRSF3-201ENST00000339436 MLKLQ8NB16 471 aa13.87□□□□□ -0.19
SRSF3-201ENST00000339436 TMC2Q8TDI7 906 aa13.87□□□□□ -0.19
SRSF3-201ENST00000339436 RIN2Q8WYP3 895 aaPredicted RBP13.87□□□□□ -0.19
SRSF3-201ENST00000339436 PIK3R5Q8WYR1 880 aa13.87□□□□□ -0.19
SRSF3-201ENST00000339436 CDCA3Q99618 268 aaPredicted RBP13.87□□□□□ -0.19
SRSF3-201ENST00000339436 TMEM63CQ9P1W3 806 aa13.87□□□□□ -0.19
SRSF3-201ENST00000339436 DOCK6Q96HP0 2047 aa13.87□□□□□ -0.19
SRSF3-201ENST00000339436 M0QZQ0 153 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 PER2O15055 1255 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 SPTLC1O15269 473 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 SLC34A2O95436 690 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 CNPP09543 421 aaKnown RBP13.86□□□□□ -0.19
SRSF3-201ENST00000339436 PAX3P23760 479 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 PNPLA4P41247 253 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 TAF6P49848 677 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 DLG4P78352 724 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 CREMQ03060 361 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 BFSP1Q12934 665 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 SKIV2LQ15477 1246 aaKnown RBP13.86□□□□□ -0.19
SRSF3-201ENST00000339436 PSMD5Q16401 504 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 PRSS55Q6UWB4 352 aaPredicted RBP13.86□□□□□ -0.19
SRSF3-201ENST00000339436 USP37Q86T82 979 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 RBM23Q86U06 439 aaKnown RBP13.86□□□□□ -0.19
SRSF3-201ENST00000339436 CEP57Q86XR8 500 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 LRRC52Q8N7C0 313 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 EFHBQ8N7U6 833 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms