RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 SSTR3P32745 418 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP1-201ENST00000339269 IREB2P48200 963 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP1-201ENST00000339269 NOP14P78316 857 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP1-201ENST00000339269 BIRC3Q13489 604 aa13.86□□□□□ -0.19
CDK5RAP1-201ENST00000339269 WDR44Q5JSH3 913 aa13.86□□□□□ -0.19
CDK5RAP1-201ENST00000339269 SEL1L2Q5TEA6 688 aa13.86□□□□□ -0.19
CDK5RAP1-201ENST00000339269 DAB2IPQ5VWQ8 1189 aa13.86□□□□□ -0.19
CDK5RAP1-201ENST00000339269 CCDC62Q6P9F0 684 aa13.86□□□□□ -0.19
CDK5RAP1-201ENST00000339269 ZPBP2Q6X784 338 aa13.86□□□□□ -0.19
CDK5RAP1-201ENST00000339269 ABRAQ8N0Z2 381 aa13.86□□□□□ -0.19
CDK5RAP1-201ENST00000339269 RNF25Q96BH1 459 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP1-201ENST00000339269 FMO2Q99518 471 aa13.86□□□□□ -0.19
CDK5RAP1-201ENST00000339269 NRBP2Q9NSY0 501 aa13.86□□□□□ -0.19
CDK5RAP1-201ENST00000339269 CSADQ9Y600 493 aa13.86□□□□□ -0.19
CDK5RAP1-201ENST00000339269 SPDYE5A6NIY4 337 aa13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 DCDC2CA8MYV0 355 aa13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 HMGB1P1B2RPK0 211 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 CST3P01034 146 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 MARK3P27448 753 aa13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 KCNJ1P48048 391 aa13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 ZNF157P51786 506 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 RWDD2BP57060 319 aa13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 CELF3Q5SZQ8 465 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 FAM160B1Q5W0V3 765 aa13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 GPAT2Q6NUI2 795 aa13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 RGMBQ6NW40 437 aa13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 CCDC137Q6PK04 289 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 ANKS1BQ7Z6G8 1248 aa13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 PASD1Q8IV76 773 aa13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 DNAJC5GQ8N7S2 189 aa13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 RBBP8NLQ8NC74 664 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 ACO2Q99798 780 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 LRRC19Q9H756 370 aa13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 SLC12A6Q9UHW9 1150 aa13.85□□□□□ -0.19
CDK5RAP1-201ENST00000339269 LDHAP00338 332 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 ASS1P00966 412 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 SHBGP04278 402 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 MYBL1P10243 752 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 PROZP22891 400 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 MAPK4P31152 587 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 VEGFBP49765 207 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 TAS2R40P59535 323 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 LAMTOR4Q0VGL1 99 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 MTMR3Q13615 1198 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 NCOA4Q13772 614 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 PLCB4Q15147 1175 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 LLGL1Q15334 1064 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 ZNF568Q3ZCX4 644 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 SPDYCQ5MJ68 293 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 PLEKHA7Q6IQ23 1121 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 TMEM270Q6UE05 265 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 PHF13Q86YI8 300 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 LRRC71Q8N4P6 559 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 UBLCP1Q8WVY7 318 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 COPS5Q92905 334 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 ZBTB10Q96DT7 871 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 HHIPL1Q96JK4 782 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 CAPNS2Q96L46 248 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 RABEP2Q9H5N1 569 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 PTPRHQ9HD43 1115 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 AGTPBP1Q9UPW5 1226 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 PCDHB4Q9Y5E5 795 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 TCRBV5S1A1TA0A578 114 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 CXCL11O14625 94 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 MEFVO15553 781 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 TOM1L1O75674 476 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 PROSCO94903 275 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 GJB6O95452 261 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 GJB1P08034 283 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 HARSP12081 509 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 GJA5P36382 358 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 FNTAP49354 379 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 PLTPP55058 493 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 BPIFB4P59827 614 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 IRX3P78415 501 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 GUCY1A3Q02108 690 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 MCL1Q07820 350 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 MAMLD1Q13495 774 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 ZBTB33Q86T24 672 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 SRLQ86TD4 932 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 ERO1BQ86YB8 467 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 TMEM130Q8N3G9 435 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 TRAPPC12Q8WVT3 735 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 SLCO2A1Q92959 643 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 C11orf70Q9BRQ4 267 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 R3HDM2Q9Y2K5 976 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 ATP8A1Q9Y2Q0 1164 aa13.84□□□□□ -0.19
CDK5RAP1-201ENST00000339269 HOXC6P09630 235 aa13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 NUDT17P0C025 328 aa13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 GNA15P30679 374 aa13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 KLF1Q13351 362 aaPredicted RBP13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 LDLRAD1Q5T700 205 aa13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 AGBL2Q5U5Z8 902 aa13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 IER5Q5VY09 327 aa13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 WDR49Q8IV35 697 aa13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 FBXO16Q8IX29 292 aaPredicted RBP13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ANKRD13AQ8IZ07 590 aa13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 C1orf54Q8WWF1 131 aa13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ART4Q93070 314 aa13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 TLCD1Q96CP7 247 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms