RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 ATG2AQ2TAZ0 1938 aa12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 GOLGA8IPA6NC78 632 aa12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 GOLGA8JA6NMD2 632 aa12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 MEFVO15553 781 aaPredicted RBP12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 KLRC4O43908 158 aa12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 KINO60870 393 aaKnown RBP12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 SMC2O95347 1197 aa12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 FGFR3P22607 806 aa12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 CLCN4P51793 760 aa12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 DPYDQ12882 1025 aa12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 SMAD2Q15796 467 aaKnown RBP12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 RTP2Q5QGT7 225 aa12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 CRELD2Q6UXH1 353 aaPredicted RBP12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 DSTYKQ6XUX3 929 aa12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 FMR1NBQ8N0W7 255 aaPredicted RBP12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 VN1R2Q8NFZ6 395 aa12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 LNX1Q8TBB1 728 aaPredicted RBP12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 B3GALT6Q96L58 329 aa12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 RIPOR3Q96MK2 946 aa12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 TIGD1Q96MW7 591 aa12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 GTPBP4Q9BZE4 634 aaKnown RBP12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 PLEKHA4Q9H4M7 779 aa12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 AGPAT3Q9NRZ7 376 aa12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 HSPBP1Q9NZL4 362 aa12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 TRIP11Q15643 1979 aa12.27□□□□□ -0.45
SLC28A1-202ENST00000338602 RHOBTB3O94955 611 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 NFICP08651 508 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 IL9P15248 144 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 EPCAMP16422 314 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 BRCC3P46736 316 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 RBM10P98175 930 aaKnown RBP12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 TFAMQ00059 246 aaKnown RBP12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 STK4Q13043 487 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 KCNB1Q14721 858 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 TMEM31Q5JXX7 168 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 ATAT1Q5SQI0 421 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 PRSS55Q6UWB4 352 aaPredicted RBP12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 USP37Q86T82 979 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 PALB2Q86YC2 1186 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 XXYLT1Q8NBI6 393 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 C3orf58Q8NDZ4 430 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 SUSD3Q96L08 255 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 NECTIN4Q96NY8 510 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 OXCT2Q9BYC2 517 aaPredicted RBP12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 ADAM7Q9H2U9 754 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 SFXN1Q9H9B4 322 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 DPP3Q9NY33 737 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 PCDHB8Q9UN66 801 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 USP15Q9Y4E8 981 aaPredicted RBP12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 BACE2Q9Y5Z0 518 aa12.26□□□□□ -0.45
SLC28A1-202ENST00000338602 I3L4J1 428 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 CLIC2O15247 247 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 TGFB1I1O43294 461 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 CALUO43852 315 aaPredicted RBP12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 EXOC3O60645 756 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 PRPF40AO75400 957 aaKnown RBP12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 TMEM191BP0C7N4 346 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 PRR29P0C7W0 189 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 TKTP29401 623 aaKnown RBP12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 HOXD13P35453 343 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 PNPLA4P41247 253 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 MTHFRP42898 656 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 CYP2J2P51589 502 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 VARS2Q5ST30 1063 aaKnown RBP12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 C9orf57Q5W0N0 161 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 SYCE2Q6PIF2 218 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 CD300LGQ6UXG3 332 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 CYP26C1Q6V0L0 522 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 GLYCTKQ8IVS8 523 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 C12orf56Q8IXR9 622 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 ANKRD36BP1Q96IX9 119 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 NECAB3Q96P71 396 aaPredicted RBP12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 FNBP1Q96RU3 617 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 MAN1C1Q9NR34 630 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 MTRRQ9UBK8 725 aa12.25□□□□□ -0.45
SLC28A1-202ENST00000338602 PDXKO00764 312 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 TGM5O43548 720 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 TNNC2P02585 160 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 ODC1P11926 461 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 RPL17P18621 184 aaKnown RBP12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 SSTR3P32745 418 aaPredicted RBP12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 OR1D2P34982 312 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 TAF6P49848 677 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 GUCY2FP51841 1108 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 YWHAHQ04917 246 aaPredicted RBP12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 SNW1Q13573 536 aaKnown RBP12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 RAB33AQ14088 237 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 CBX2Q14781 532 aaPredicted RBP12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 SNRNP35Q16560 246 aaKnown RBP12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 DUOXA2Q1HG44 320 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 SV2CQ496J9 727 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 RARS2Q5T160 578 aaKnown RBP12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 LIN9Q5TKA1 542 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 ZNF280DQ6N043 979 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 METTL23Q86XA0 190 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 ADHFE1Q8IWW8 467 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 ELOA2Q8IYF1 753 aaPredicted RBP12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 RDH13Q8NBN7 331 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 KIAA0895Q8NCT3 520 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 KREMEN2Q8NCW0 462 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms