RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 SPRYD7Q5W111 196 aa11.86□□□□□ -0.51
POLR1B-202ENST00000333990 GPAT2Q6NUI2 795 aa11.86□□□□□ -0.51
POLR1B-202ENST00000333990 TRIM65Q6PJ69 517 aa11.86□□□□□ -0.51
POLR1B-202ENST00000333990 MMS22LQ6ZRQ5 1243 aa11.86□□□□□ -0.51
POLR1B-202ENST00000333990 RILPQ96NA2 401 aa11.86□□□□□ -0.51
POLR1B-202ENST00000333990 TRAF3IP3Q9Y228 551 aa11.86□□□□□ -0.51
POLR1B-202ENST00000333990 FAM187AA6NFU0 413 aa11.86□□□□□ -0.51
POLR1B-202ENST00000333990 SMIM22K7EJ46 135 aa11.86□□□□□ -0.51
POLR1B-202ENST00000333990 STK25O00506 426 aa11.86□□□□□ -0.51
POLR1B-202ENST00000333990 SLC4A1P02730 911 aa11.86□□□□□ -0.51
POLR1B-202ENST00000333990 URODP06132 367 aa11.86□□□□□ -0.51
POLR1B-202ENST00000333990 LHX1P48742 406 aa11.86□□□□□ -0.51
POLR1B-202ENST00000333990 RPL10AP62906 217 aaKnown RBP11.86□□□□□ -0.51
POLR1B-202ENST00000333990 GLRA4Q5JXX5 417 aa11.86□□□□□ -0.51
POLR1B-202ENST00000333990 PLPPR4Q7Z2D5 763 aa11.86□□□□□ -0.51
POLR1B-202ENST00000333990 RCOR2Q8IZ40 523 aa11.86□□□□□ -0.51
POLR1B-202ENST00000333990 OSBPL9Q96SU4 736 aa11.86□□□□□ -0.51
POLR1B-202ENST00000333990 CIB2O75838 187 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 PAPOLAP51003 745 aaKnown RBP11.85□□□□□ -0.51
POLR1B-202ENST00000333990 CYP24A1Q07973 514 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 ST3GAL1Q11201 340 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 ZNF235Q14590 738 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 TRIP13Q15645 432 aaPredicted RBP11.85□□□□□ -0.51
POLR1B-202ENST00000333990 EFHBQ8N7U6 833 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.85□□□□□ -0.51
POLR1B-202ENST00000333990 FAM71BQ8TC56 605 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 TRIM56Q9BRZ2 755 aaKnown RBP11.85□□□□□ -0.51
POLR1B-202ENST00000333990 MTMR12Q9C0I1 747 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 TMEM39AQ9NV64 488 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 ANGPTL3Q9Y5C1 460 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 EXOC1LA0A1B0GW35 172 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 AP3B1O00203 1094 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 MT-ND3P03897 115 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 ALDH2P05091 517 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 PTGER2P43116 358 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 ROR1Q01973 937 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 DEUP1Q05D60 604 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 RBM43Q6ZSC3 357 aaKnown RBP11.85□□□□□ -0.51
POLR1B-202ENST00000333990 MSL3Q8N5Y2 521 aaKnown RBP11.85□□□□□ -0.51
POLR1B-202ENST00000333990 MGARPQ8TDB4 240 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 DPF3Q92784 378 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 ITGA11Q9UKX5 1188 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 PLAGL2Q9UPG8 496 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 NR2E3Q9Y5X4 410 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 SPATA31C2B4DYI2 1134 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 EML1O00423 815 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 NEMP1O14524 444 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 APOL1O14791 398 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 PQBP1O60828 265 aaKnown RBP11.85□□□□□ -0.51
POLR1B-202ENST00000333990 KRT37O76014 449 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 LRG1P02750 347 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 SLC2A3P11169 496 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 IL9RQ01113 521 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 ARHGAP15Q53QZ3 475 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 ZNF280DQ6N043 979 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 C10orf67Q8IYJ2 551 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 ZNF518BQ9C0D4 1074 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 PRDM10Q9NQV6 1147 aa11.85□□□□□ -0.51
POLR1B-202ENST00000333990 PHRF1Q9P1Y6 1649 aaKnown RBP11.84□□□□□ -0.51
POLR1B-202ENST00000333990 PLIN4Q96Q06 1357 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 FOXP2O15409 715 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 EGFRP00533 1210 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 NOL9Q5SY16 702 aaKnown RBP11.84□□□□□ -0.51
POLR1B-202ENST00000333990 CPA5Q8WXQ8 436 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 CHP1Q99653 195 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 PI4K2AQ9BTU6 479 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 GTF3C4Q9UKN8 822 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 IQANK1A0A1B0GTG1 560 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 CFAP69A5D8W1 941 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 PTGISQ16647 500 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 FBXO47Q5MNV8 452 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 TDRD10Q5VZ19 366 aaKnown RBP11.84□□□□□ -0.51
POLR1B-202ENST00000333990 TRIM59Q8IWR1 403 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 LRRC8CQ8TDW0 803 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 C12orf42Q96LP6 360 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 TMEM134Q9H6X4 195 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 KLHL14Q9P2G3 628 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 FAN1Q9Y2M0 1017 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 PCDHB12Q9Y5F1 795 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 BTBD19C9JJ37 291 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 CYB561D2O14569 222 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 RASSF2P50749 326 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 DRP2Q13474 957 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 GOLGA7BQ2TAP0 167 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 ANO4Q32M45 955 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 CCDC60Q8IWA6 550 aaPredicted RBP11.84□□□□□ -0.51
POLR1B-202ENST00000333990 SLC30A5Q8TAD4 765 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 PORCNQ9H237 461 aa11.84□□□□□ -0.51
POLR1B-202ENST00000333990 GOLGA8QA0A0J9YX86 632 aa11.83□□□□□ -0.51
POLR1B-202ENST00000333990 GOLGA8OA6NCC3 632 aa11.83□□□□□ -0.51
POLR1B-202ENST00000333990 GOLGA8NF8WBI6 632 aa11.83□□□□□ -0.51
POLR1B-202ENST00000333990 GHRP10912 638 aa11.83□□□□□ -0.51
POLR1B-202ENST00000333990 DHX34Q14147 1143 aaKnown RBP11.83□□□□□ -0.51
POLR1B-202ENST00000333990 INPP4AQ96PE3 977 aaPredicted RBP11.83□□□□□ -0.51
POLR1B-202ENST00000333990 PPP1R2P1Q96PQ5 205 aa11.83□□□□□ -0.51
POLR1B-202ENST00000333990 CACYBPQ9HB71 228 aaKnown RBP11.83□□□□□ -0.51
POLR1B-202ENST00000333990 TRPC7Q9HCX4 862 aa11.83□□□□□ -0.51
POLR1B-202ENST00000333990 NAGPAQ9UK23 515 aa11.83□□□□□ -0.51
POLR1B-202ENST00000333990 FNDC3AQ9Y2H6 1198 aaKnown RBP11.83□□□□□ -0.51
POLR1B-202ENST00000333990 SH3BP1Q9Y3L3 701 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms