RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 CIB2O75838 187 aa12.55□□□□□ -0.4
LIMK2-202ENST00000333611 SERPINB6P35237 376 aa12.55□□□□□ -0.4
LIMK2-202ENST00000333611 SLC34A1Q06495 639 aa12.55□□□□□ -0.4
LIMK2-202ENST00000333611 KYNUQ16719 465 aa12.55□□□□□ -0.4
LIMK2-202ENST00000333611 RGS9BPQ6ZS82 235 aa12.55□□□□□ -0.4
LIMK2-202ENST00000333611 FBXO11Q86XK2 927 aa12.55□□□□□ -0.4
LIMK2-202ENST00000333611 TAB3Q8N5C8 712 aaPredicted RBP12.55□□□□□ -0.4
LIMK2-202ENST00000333611 TLCD1Q96CP7 247 aa12.55□□□□□ -0.4
LIMK2-202ENST00000333611 OLFM3Q96PB7 478 aa12.55□□□□□ -0.4
LIMK2-202ENST00000333611 TRAIPQ9BWF2 469 aa12.55□□□□□ -0.4
LIMK2-202ENST00000333611 ZC3H12CQ9C0D7 883 aaKnown RBP12.55□□□□□ -0.4
LIMK2-202ENST00000333611 NDE1Q9NXR1 346 aa12.55□□□□□ -0.4
LIMK2-202ENST00000333611 COG5Q9UP83 839 aa12.55□□□□□ -0.4
LIMK2-202ENST00000333611 SHANK3Q9BYB0 1731 aa12.55□□□□□ -0.4
LIMK2-202ENST00000333611 A0A0J9YVX5 310 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 hCG_1984214I3L0E3 225 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 ZBED4O75132 1171 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 CYP1A1P04798 512 aaPredicted RBP12.54□□□□□ -0.4
LIMK2-202ENST00000333611 COMTP21964 271 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 SSTR3P32745 418 aaPredicted RBP12.54□□□□□ -0.4
LIMK2-202ENST00000333611 MTM1Q13496 603 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 EPC2Q52LR7 807 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 SH3D19Q5HYK7 790 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 RBM44Q6ZP01 1051 aaKnown RBP12.54□□□□□ -0.4
LIMK2-202ENST00000333611 MARK2Q7KZI7 788 aaKnown RBP12.54□□□□□ -0.4
LIMK2-202ENST00000333611 ZNF713Q8N859 430 aaPredicted RBP12.54□□□□□ -0.4
LIMK2-202ENST00000333611 SLC30A5Q8TAD4 765 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 ATP8B4Q8TF62 1192 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 NAT14Q8WUY8 206 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 ATG4AQ8WYN0 398 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 NGLY1Q96IV0 654 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 FAM84AQ96KN4 292 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 CORO1BQ9BR76 489 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 SIX2Q9NPC8 291 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 MYH7BA7E2Y1 1941 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 STRCP1A6NGW2 1772 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 ANKRD63C9JTQ0 380 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 MSH4O15457 936 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 SPATA31C1P0DKV0 1188 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 CA4P22748 312 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 PGM1P36871 562 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 TBL3Q12788 808 aaKnown RBP12.54□□□□□ -0.4
LIMK2-202ENST00000333611 MAPK7Q13164 816 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 TMEM53Q6P2H8 277 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 ARHGEF18Q6ZSZ5 1173 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 SYT2Q8N9I0 419 aaPredicted RBP12.54□□□□□ -0.4
LIMK2-202ENST00000333611 HES6Q96HZ4 224 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 P2RX7Q99572 595 aaKnown RBP12.54□□□□□ -0.4
LIMK2-202ENST00000333611 GRIP2Q9C0E4 1043 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 HEY1Q9Y5J3 304 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 K7ENM7 598 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 P4HA2O15460 535 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 TFPTP0C1Z6 253 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 NAT1P18440 290 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 TUFMP49411 452 aaKnown RBP12.54□□□□□ -0.4
LIMK2-202ENST00000333611 POLGP54098 1239 aaPredicted RBP12.54□□□□□ -0.4
LIMK2-202ENST00000333611 PTENP60484 403 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 KDSRQ06136 332 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 MGAT5Q09328 741 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 AUHQ13825 339 aaKnown RBP12.54□□□□□ -0.4
LIMK2-202ENST00000333611 C16orf72Q14CZ0 275 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 ACSBG2Q5FVE4 666 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 EMC10Q5UCC4 262 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 PRUNE1Q86TP1 453 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 ARAP2Q8WZ64 1704 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 ROBO3Q96MS0 1386 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 NUP85Q9BW27 656 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 HEMGNQ9BXL5 484 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 FAM192AQ9GZU8 254 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 ASCC2Q9H1I8 757 aaPredicted RBP12.54□□□□□ -0.4
LIMK2-202ENST00000333611 ADAM7Q9H2U9 754 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 PHTF1Q9UMS5 762 aa12.54□□□□□ -0.4
LIMK2-202ENST00000333611 EPHB1P54762 984 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 NAA20P61599 178 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 DLG4P78352 724 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 MED21Q13503 144 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 C1orf146Q5VVC0 180 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 DAB2IPQ5VWQ8 1189 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 FYB2Q5VWT5 728 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 IYDQ6PHW0 289 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 C9orf72Q96LT7 481 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 CDCA7Q9BWT1 371 aaPredicted RBP12.53□□□□□ -0.4
LIMK2-202ENST00000333611 AMNQ9BXJ7 453 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 PARVGQ9HBI0 331 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 ARMCX1Q9P291 453 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.53□□□□□ -0.4
LIMK2-202ENST00000333611 COMMD3-BMI1R4GMX3 469 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 CLDN3O15551 220 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 LMNAP02545 664 aaKnown RBP12.53□□□□□ -0.4
LIMK2-202ENST00000333611 ASLP04424 464 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 HARSP12081 509 aaKnown RBP12.53□□□□□ -0.4
LIMK2-202ENST00000333611 RPA1P27694 616 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 STRN3Q13033 797 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 RASA3Q14644 834 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 RINT1Q6NUQ1 792 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 C16orf87Q6PH81 154 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 EPM2AIP1Q7L775 607 aaPredicted RBP12.53□□□□□ -0.4
LIMK2-202ENST00000333611 APLFQ8IW19 511 aaPredicted RBP12.53□□□□□ -0.4
LIMK2-202ENST00000333611 RAVER1Q8IY67 606 aaKnown RBP12.53□□□□□ -0.4
LIMK2-202ENST00000333611 NRG4Q8WWG1 115 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms