RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 ADCY3O60266 1144 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 PDGFRAP16234 1089 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 KRT17Q04695 432 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 GPS1Q13098 491 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 FYB2Q5VWT5 728 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 ARHGEF18Q6ZSZ5 1173 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 TMEM161BQ8NDZ6 487 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 PYROXD1Q8WU10 500 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 INPP4AQ96PE3 977 aaPredicted RBP10.09□□□□□ -0.79
SS18L1-201ENST00000331758 SENP7Q9BQF6 1050 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.09□□□□□ -0.79
SS18L1-201ENST00000331758 MYH13Q9UKX3 1938 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 IL18RAPO95256 599 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 CXCL8P10145 99 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 LCP1P13796 627 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 ADCYAP1R1P41586 468 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 EIF3BP55884 814 aaKnown RBP10.09□□□□□ -0.79
SS18L1-201ENST00000331758 ZNF280AP59817 542 aaPredicted RBP10.09□□□□□ -0.79
SS18L1-201ENST00000331758 ZNF484Q5JVG2 852 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 ZC3H18Q86VM9 953 aaKnown RBP10.09□□□□□ -0.79
SS18L1-201ENST00000331758 MMGT1Q8N4V1 131 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 CCHCR1Q8TD31 782 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 GMLQ99445 158 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 TLR10Q9BXR5 811 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 CARD9Q9H257 536 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 DHX35Q9H5Z1 703 aaKnown RBP10.09□□□□□ -0.79
SS18L1-201ENST00000331758 RRP15Q9Y3B9 282 aaKnown RBP10.09□□□□□ -0.79
SS18L1-201ENST00000331758 STRCQ7RTU9 1775 aa10.09□□□□□ -0.79
SS18L1-201ENST00000331758 USP54Q70EL1 1684 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 PDE4DIPQ5VU43 2346 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 FGFR4P22455 802 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 SLC1A1P43005 524 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 SLC26A2P50443 739 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 PMS2P54278 862 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 KYAT1Q16773 422 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 CFAP157Q5JU67 520 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 KIAA1841Q6NSI8 718 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 DNAAF3Q8N9W5 541 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 REPS2Q8NFH8 660 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 CLEC4DQ8WXI8 215 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 ACSF2Q96CM8 615 aaPredicted RBP10.08□□□□□ -0.8
SS18L1-201ENST00000331758 ZNF560Q96MR9 790 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 CGRRF1Q99675 332 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 SYT17Q9BSW7 474 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 RRN3P2A6NIE6 340 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 LRRIQ3A6PVS8 624 aaPredicted RBP10.08□□□□□ -0.8
SS18L1-201ENST00000331758 HMGB1P1B2RPK0 211 aaPredicted RBP10.08□□□□□ -0.8
SS18L1-201ENST00000331758 KRT14P02533 472 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 ADRB2P07550 413 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 SAT1P21673 171 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 GTF2BQ00403 316 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 DHX34Q14147 1143 aaKnown RBP10.08□□□□□ -0.8
SS18L1-201ENST00000331758 CCDC6Q16204 474 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 AMHR2Q16671 573 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 SMTNL2Q2TAL5 461 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 CENPUQ71F23 418 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 SH2D3CQ8N5H7 860 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 ASAP3Q8TDY4 903 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 CFAP57Q96MR6 1250 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 NT5C1AQ9BXI3 368 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 OSBPL8Q9BZF1 889 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 USP2O75604 605 aaPredicted RBP10.08□□□□□ -0.8
SS18L1-201ENST00000331758 STAG3L1P0CL83 205 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 BCAR1P56945 870 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 PPIL2Q13356 520 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 CEP57Q86XR8 500 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 EFCAB13Q8IY85 973 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 TTC39CQ8N584 583 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 TTC13Q8NBP0 860 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 SMC6Q96SB8 1091 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 OSMRQ99650 979 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.08□□□□□ -0.8
SS18L1-201ENST00000331758 MYH3P11055 1940 aa10.08□□□□□ -0.8
SS18L1-201ENST00000331758 F5H423 210 aaPredicted RBP10.07□□□□□ -0.8
SS18L1-201ENST00000331758 GLRA2P23416 452 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 MAGOHP61326 146 aaKnown RBP10.07□□□□□ -0.8
SS18L1-201ENST00000331758 COBLL1Q53SF7 1204 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 PHLDB3Q6NSJ2 640 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 RNF139Q8WU17 664 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 WNK4Q96J92 1243 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 SPATA31C2B4DYI2 1134 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 CREB3O43889 395 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 RPS6KA5O75582 802 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 CPP00450 1065 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 CALCAP01258 141 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 GZMAP12544 262 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 NME3Q13232 169 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 C1orf228Q6PIY5 440 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 ZNF677Q86XU0 584 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 JAMLQ86YT9 394 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 OR2W6PQ8NHA6 318 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 FEZF2Q8TBJ5 459 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 LENG9Q96B70 501 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 FAF2Q96CS3 445 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 PORCNQ9H237 461 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 GANQ9H2C0 597 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 CISHQ9NSE2 258 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 PRLRP16471 622 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 MSH2P43246 934 aa10.07□□□□□ -0.8
SS18L1-201ENST00000331758 CDC42EP1Q00587 391 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms