RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 ZFYVE16Q7Z3T8 1539 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 ABCC2Q92887 1545 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 A0A1W2PQ27 194 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 A0A1W2PQ64 194 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 A0A1W2PQD8 194 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 AIM2O14862 343 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 CDC27P30260 824 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 GRIN1Q05586 938 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 BAATQ14032 418 aaPredicted RBP11.09□□□□□ -0.63
CLN8-201ENST00000331222 GOLGA7BQ2TAP0 167 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 P3H1Q32P28 736 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 PLD3Q8IV08 490 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 STKLD1Q8NE28 680 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 ASAP3Q8TDY4 903 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 CPB2Q96IY4 423 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 AGBL1Q96MI9 1066 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 OSGEPL1Q9H4B0 414 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 AMACRQ9UHK6 382 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 MROH7-TTC4A0A0A0MT08 1334 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 EEF2KO00418 725 aaKnown RBP11.09□□□□□ -0.63
CLN8-201ENST00000331222 CNGA3Q16281 694 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 STRBPQ96SI9 672 aaKnown RBP11.09□□□□□ -0.63
CLN8-201ENST00000331222 ZFYVE28Q9HCC9 887 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 NMRK2Q9NPI5 230 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 SLC30A1Q9Y6M5 507 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 FOXN1O15353 648 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 CYP7B1O75881 506 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 GGPS1O95749 300 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 HNRNPCP07910 306 aaKnown RBP eCLIP11.09□□□□□ -0.63
CLN8-201ENST00000331222 AKR1B1P15121 316 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 IL10P22301 178 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 PCYT1AP49585 367 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 LONRF1Q17RB8 773 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 EPC2Q52LR7 807 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 GNASQ5JWF2 1037 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 CARNMT1Q8N4J0 409 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 TTC13Q8NBP0 860 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 VPS50Q96JG6 964 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 FAM135BQ49AJ0 1406 aa11.09□□□□□ -0.63
CLN8-201ENST00000331222 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.08□□□□□ -0.63
CLN8-201ENST00000331222 PCNAP12004 261 aa11.08□□□□□ -0.63
CLN8-201ENST00000331222 PHKG1Q16816 387 aa11.08□□□□□ -0.63
CLN8-201ENST00000331222 SARM1Q6SZW1 724 aa11.08□□□□□ -0.63
CLN8-201ENST00000331222 PAWRQ96IZ0 340 aaKnown RBP11.08□□□□□ -0.63
CLN8-201ENST00000331222 PANX2Q96RD6 677 aa11.08□□□□□ -0.63
CLN8-201ENST00000331222 KIAA1586Q9HCI6 787 aa11.08□□□□□ -0.63
CLN8-201ENST00000331222 PER1O15534 1290 aaPredicted RBP11.08□□□□□ -0.64
CLN8-201ENST00000331222 IFNAR1P17181 557 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 HARS2P49590 506 aaKnown RBP11.08□□□□□ -0.64
CLN8-201ENST00000331222 KRT76Q01546 638 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 LY9Q9HBG7 655 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 ARHGEF5Q12774 1597 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 HAUS5O94927 633 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 KRT39Q6A163 491 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.08□□□□□ -0.64
CLN8-201ENST00000331222 BFARQ9NZS9 450 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 NEK2P51955 445 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 RAD23BP54727 409 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 ACTR2P61160 394 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 AP3B2Q13367 1082 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 GALNTL6Q49A17 601 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 TNIP3Q96KP6 325 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 SPACA7Q96KW9 195 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 YME1L1Q96TA2 773 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 TSEN34Q9BSV6 310 aaKnown RBP11.08□□□□□ -0.64
CLN8-201ENST00000331222 MBD5Q9P267 1494 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 UGGT1Q9NYU2 1555 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 CCDC151A5D8V7 595 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 TRAPPC3O43617 180 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 CAPN1P07384 714 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 ALDH7A1P49419 539 aaKnown RBP11.08□□□□□ -0.64
CLN8-201ENST00000331222 EIF3BP55884 814 aaKnown RBP11.08□□□□□ -0.64
CLN8-201ENST00000331222 DEUP1Q05D60 604 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 PGS1Q32NB8 556 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 SMARCAD1Q9H4L7 1026 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 MKL2Q9ULH7 1088 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 RASSF9O75901 435 aa11.08□□□□□ -0.64
CLN8-201ENST00000331222 PLOD1Q02809 727 aaPredicted RBP11.08□□□□□ -0.64
CLN8-201ENST00000331222 EXOSC4Q9NPD3 245 aaKnown RBP11.08□□□□□ -0.64
CLN8-201ENST00000331222 ZC3H11AO75152 810 aaKnown RBP eCLIP11.07□□□□□ -0.64
CLN8-201ENST00000331222 ACADMP11310 421 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 CHI3L1P36222 383 aaPredicted RBP11.07□□□□□ -0.64
CLN8-201ENST00000331222 CDH18Q13634 790 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 ZC2HC1CQ53FD0 456 aaPredicted RBP11.07□□□□□ -0.64
CLN8-201ENST00000331222 CEP78Q5JTW2 689 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 CDKL3Q8IVW4 592 aaPredicted RBP11.07□□□□□ -0.64
CLN8-201ENST00000331222 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.07□□□□□ -0.64
CLN8-201ENST00000331222 TMEM2Q9UHN6 1383 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 A8MX80 341 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 GUCY1A2P33402 732 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 IER5Q5VY09 327 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 RHOT1Q8IXI2 618 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 SPATA16Q9BXB7 569 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 METTL5Q9NRN9 209 aaKnown RBP11.07□□□□□ -0.64
CLN8-201ENST00000331222 GGA3Q9NZ52 723 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 TARSL2A2RTX5 802 aaKnown RBP11.07□□□□□ -0.64
CLN8-201ENST00000331222 ERVV-1B6SEH8 477 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 hCG_1984214I3L0E3 225 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 PMPCBO75439 489 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 FGFR1P11362 822 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms