RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 SPECC1L-ADORA2AF8WAN1 911 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 B3GAT3O94766 335 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 NR3C2P08235 984 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 EPHB3P54753 998 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 PSMC1P62191 440 aaKnown RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 SLC26A7Q8TE54 656 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 STARD8Q92502 1023 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 RAD54LQ92698 747 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 SYN2Q92777 582 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 FAM163AQ96GL9 167 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 MSRAQ9UJ68 235 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 FAM205AQ6ZU69 1335 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 FAM187AA6NFU0 413 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 EXTL3O43909 919 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 PDHBP11177 359 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 HOXB6P17509 224 aaKnown RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 ITGAXP20702 1163 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 SERPINB9P50453 376 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 HPCAP84074 193 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 TSTA3Q13630 321 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 SCARF1Q14162 830 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 ACAP1Q15027 740 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 QRICH1Q2TAL8 776 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 RCOR2Q8IZ40 523 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 PCYOX1LQ8NBM8 494 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 C3orf20Q8ND61 904 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 RFFLQ8WZ73 363 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 CELF1Q92879 486 aaKnown RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 RIT1Q92963 219 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 RASSF4Q9H2L5 321 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 ZFATQ9P243 1243 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 CNOT8Q9UFF9 292 aaKnown RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 SMG5Q9UPR3 1016 aaKnown RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 RP1P56715 2156 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 UMODL1Q5DID0 1318 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 MAGEC1O60732 1142 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 RXRGP48443 463 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 FXR1P51114 621 aaKnown RBP eCLIP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 ARPP19P56211 112 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 CENPCQ03188 943 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 IKBKEQ14164 716 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 STARD3Q14849 445 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 TTC31Q49AM3 519 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 SARM1Q6SZW1 724 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 TTC30AQ86WT1 665 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 MICALL1Q8N3F8 863 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 TTC30BQ8N4P2 665 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 C1orf131Q8NDD1 294 aaKnown RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 PPHLN1Q8NEY8 458 aaKnown RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 TRIM31Q9BZY9 425 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 RAVER2Q9HCJ3 691 aaKnown RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 SMYD2Q9NRG4 433 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 ZNF70Q9UC06 446 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 TUBGCP4Q9UGJ1 667 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 SRP68Q9UHB9 627 aaKnown RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 PPP2R2CQ9Y2T4 447 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 COL5A2P05997 1499 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 ZNF638Q14966 1978 aaKnown RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 ABCC6O95255 1503 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 MAGEB16A2A368 324 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 APOL1O14791 398 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 CNTFP26441 200 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 BCAT1P54687 386 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 MUM1Q2TAK8 710 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 PPP6R3Q5H9R7 873 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 RETSATQ6NUM9 610 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 ZNF544Q6NX49 715 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 TXNRD3Q86VQ6 643 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 TRIM48Q8IWZ4 208 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 KLHL7Q8IXQ5 586 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 CCDC24Q8N4L8 307 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 SHCBP1Q8NEM2 672 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 SH3GL1Q99961 368 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 TRIM55Q9BYV6 548 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 ASB7Q9H672 318 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 ZDHHC4Q9NPG8 344 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 TLR8Q9NR97 1041 aaKnown RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 AIPL1Q9NZN9 384 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 STARD13Q9Y3M8 1113 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 L3MBTL1Q9Y468 752 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 PRR36Q9H6K5 1346 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 A0A087WUV0 522 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 POLBP06746 335 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 SRGNP10124 158 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 AVPR1AP37288 418 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 EHHADHQ08426 723 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 FAM102AQ5T9C2 384 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 MRNIPQ6NTE8 343 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 FBXO33Q7Z6M2 555 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 ADAT2Q7Z6V5 191 aaKnown RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 NBPF15Q8N660 670 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 ACSF2Q96CM8 615 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-201ENST00000309964 PPP1R16AQ96I34 528 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 VCPIP1Q96JH7 1222 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 UROC1Q96N76 676 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 NLNQ9BYT8 704 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 KIAA1683Q9H0B3 1180 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 LY9Q9HBG7 655 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 ENTPD7Q9NQZ7 604 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms