RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 GNA15P30679 374 aa11.34□□□□□ -0.59
CLP1-201ENST00000302731 CXCR5P32302 372 aa11.34□□□□□ -0.59
CLP1-201ENST00000302731 GJA9P57773 515 aa11.34□□□□□ -0.59
CLP1-201ENST00000302731 PURAQ00577 322 aaKnown RBP11.34□□□□□ -0.59
CLP1-201ENST00000302731 CENPCQ03188 943 aa11.34□□□□□ -0.59
CLP1-201ENST00000302731 NOGQ13253 232 aa11.34□□□□□ -0.59
CLP1-201ENST00000302731 CLUL1Q15846 466 aa11.34□□□□□ -0.59
CLP1-201ENST00000302731 FSCN1Q16658 493 aaKnown RBP11.34□□□□□ -0.59
CLP1-201ENST00000302731 ZNF699Q32M78 642 aa11.34□□□□□ -0.59
CLP1-201ENST00000302731 CDR2LQ86X02 465 aaPredicted RBP11.34□□□□□ -0.59
CLP1-201ENST00000302731 RASGEF1CQ8N431 466 aa11.34□□□□□ -0.59
CLP1-201ENST00000302731 CPB2Q96IY4 423 aa11.34□□□□□ -0.59
CLP1-201ENST00000302731 ACAP3Q96P50 834 aa11.34□□□□□ -0.59
CLP1-201ENST00000302731 GPBP1L1Q9HC44 474 aaPredicted RBP11.34□□□□□ -0.59
CLP1-201ENST00000302731 ARFGAP3Q9NP61 516 aa11.34□□□□□ -0.59
CLP1-201ENST00000302731 CTTNBP2NLQ9P2B4 639 aa11.34□□□□□ -0.59
CLP1-201ENST00000302731 TTC7AQ9ULT0 858 aaPredicted RBP11.34□□□□□ -0.59
CLP1-201ENST00000302731 COG5Q9UP83 839 aa11.34□□□□□ -0.59
CLP1-201ENST00000302731 DERAQ9Y315 318 aa11.34□□□□□ -0.59
CLP1-201ENST00000302731 MROH7Q68CQ1 1323 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 C17orf102A2RUQ5 167 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 KCNK3O14649 394 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 CSDE1O75534 798 aaKnown RBP11.33□□□□□ -0.6
CLP1-201ENST00000302731 ZRANB2O95218 330 aaKnown RBP eCLIP11.33□□□□□ -0.6
CLP1-201ENST00000302731 MYL3P08590 195 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 PSMC4P43686 418 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 OSTNP61366 133 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 LACTBP83111 547 aaPredicted RBP11.33□□□□□ -0.6
CLP1-201ENST00000302731 KIZQ2M2Z5 673 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 SLC10A6Q3KNW5 377 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 NOTUMQ6P988 496 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 SLC27A1Q6PCB7 646 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 TMEM192Q8IY95 271 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 C1orf127Q8N9H9 656 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 ELMO3Q96BJ8 720 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 ZNF653Q96CK0 615 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 TSPAN18Q96SJ8 248 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 PPP1R16BQ96T49 567 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 PNKPQ96T60 521 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 PSMB7Q99436 277 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 BCO2Q9BYV7 579 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 UPF3AQ9H1J1 476 aaKnown RBP11.33□□□□□ -0.6
CLP1-201ENST00000302731 CARD9Q9H257 536 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 EPC1Q9H2F5 836 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 TMEM59LQ9UK28 342 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 ITGA11Q9UKX5 1188 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 PACSIN2Q9UNF0 486 aaPredicted RBP11.33□□□□□ -0.6
CLP1-201ENST00000302731 UMODL1Q5DID0 1318 aa11.33□□□□□ -0.6
CLP1-201ENST00000302731 LSM8O95777 96 aaKnown RBP11.32□□□□□ -0.6
CLP1-201ENST00000302731 RPLP2P05387 115 aaKnown RBP11.32□□□□□ -0.6
CLP1-201ENST00000302731 NFICP08651 508 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 RHOXF2BP0C7M4 288 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 EIF4BP23588 611 aaKnown RBP11.32□□□□□ -0.6
CLP1-201ENST00000302731 HOXA11P31270 313 aaPredicted RBP11.32□□□□□ -0.6
CLP1-201ENST00000302731 ASPAP45381 313 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 NSFP46459 744 aaKnown RBP11.32□□□□□ -0.6
CLP1-201ENST00000302731 TMEM132DQ14C87 1099 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 ZNF667Q5HYK9 610 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 JADE1Q6IE81 842 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 CC2D1AQ6P1N0 951 aaPredicted RBP11.32□□□□□ -0.6
CLP1-201ENST00000302731 TAF2Q6P1X5 1199 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 CATSPER4Q7RTX7 472 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 PHF13Q86YI8 300 aaPredicted RBP11.32□□□□□ -0.6
CLP1-201ENST00000302731 MCOLN2Q8IZK6 566 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 TTC39CQ8N584 583 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 USP38Q8NB14 1042 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 TRPV1Q8NER1 839 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 CXorf38Q8TB03 319 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 LENG1Q96BZ8 264 aaPredicted RBP11.32□□□□□ -0.6
CLP1-201ENST00000302731 RHOXF2Q9BQY4 288 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 CCDC94Q9BW85 323 aaPredicted RBP11.32□□□□□ -0.6
CLP1-201ENST00000302731 ZNF518BQ9C0D4 1074 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 FAM49AQ9H0Q0 323 aaPredicted RBP11.32□□□□□ -0.6
CLP1-201ENST00000302731 CYP3A43Q9HB55 503 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 SPC25Q9HBM1 224 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 CISHQ9NSE2 258 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 SIX4Q9UIU6 781 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 ALG6Q9Y672 507 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 CASP8AP2Q9UKL3 1982 aa11.32□□□□□ -0.6
CLP1-201ENST00000302731 PGRMC1O00264 195 aaKnown RBP11.31□□□□□ -0.6
CLP1-201ENST00000302731 DDX3YO15523 660 aaKnown RBP11.31□□□□□ -0.6
CLP1-201ENST00000302731 MEFVO15553 781 aaPredicted RBP11.31□□□□□ -0.6
CLP1-201ENST00000302731 SEPT4O43236 478 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 ECM2O94769 699 aaPredicted RBP11.31□□□□□ -0.6
CLP1-201ENST00000302731 P4HA1P13674 534 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 NOMO3P69849 1222 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 BEX3Q00994 111 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 C2orf54Q08AI8 447 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 LIN9Q5TKA1 542 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 RUFY4Q6ZNE9 571 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 MON1BQ7L1V2 547 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 ZNF564Q8TBZ8 553 aaPredicted RBP11.31□□□□□ -0.6
CLP1-201ENST00000302731 ZNF606Q8WXB4 792 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 TRIB2Q92519 343 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 ZIC5Q96T25 663 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLP1-201ENST00000302731 MTG1Q9BT17 334 aaPredicted RBP11.31□□□□□ -0.6
CLP1-201ENST00000302731 NUP85Q9BW27 656 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 CFHR5Q9BXR6 569 aa11.31□□□□□ -0.6
CLP1-201ENST00000302731 WNT8AQ9H1J5 351 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms