RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 PDP2Q9P2J9 529 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 LNPEPQ9UIQ6 1025 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 GOLGA8IPA6NC78 632 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 GOLGA8JA6NMD2 632 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 ENO1P06733 434 aaKnown RBP11.63□□□□□ -0.55
SNX20-201ENST00000300590 GYS1P13807 737 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 USP46P62068 366 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 AP1B1Q10567 949 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 IKQ13123 557 aaPredicted RBP11.63□□□□□ -0.55
SNX20-201ENST00000300590 KIF22Q14807 665 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 CEP128Q6ZU80 1094 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 APLFQ8IW19 511 aaPredicted RBP11.63□□□□□ -0.55
SNX20-201ENST00000300590 ABTB1Q969K4 478 aaPredicted RBP11.63□□□□□ -0.55
SNX20-201ENST00000300590 HIC2Q96JB3 615 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 SH2D3AQ9BRG2 576 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 TIPINQ9BVW5 301 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 SPATA16Q9BXB7 569 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 ANKFY1Q9P2R3 1169 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 LGALS13Q9UHV8 139 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 NEU2Q9Y3R4 380 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 A0A1B0GUL6 1792 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 NUP98P52948 1817 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 PI4K2BG5E9Z4 385 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 EML1O00423 815 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 CD58P19256 250 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 HOXA13P31271 388 aaPredicted RBP11.62□□□□□ -0.55
SNX20-201ENST00000300590 EFTUD2Q15029 972 aaKnown RBP eCLIP11.62□□□□□ -0.55
SNX20-201ENST00000300590 ACBD5Q5T8D3 534 aaPredicted RBP11.62□□□□□ -0.55
SNX20-201ENST00000300590 RINT1Q6NUQ1 792 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 C16orf86Q6ZW13 317 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 RIBC1Q8N443 379 aaPredicted RBP11.62□□□□□ -0.55
SNX20-201ENST00000300590 ZSWIM2Q8NEG5 633 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 FBXO27Q8NI29 283 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 DENND1AQ8TEH3 1009 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 CD101Q93033 1021 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 TTC17Q96AE7 1141 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 CCDC127Q96BQ5 260 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 THTPAQ9BU02 230 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 DCLK3Q9C098 648 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 ASCC2Q9H1I8 757 aaPredicted RBP11.62□□□□□ -0.55
SNX20-201ENST00000300590 MTMR4Q9NYA4 1195 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 CHMP2BQ9UQN3 213 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 ALS2Q96Q42 1657 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 C2CD2LO14523 706 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 FSCN2O14926 492 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 ECE2O60344 883 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 OR6B1O95007 311 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 RPA1P27694 616 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 ARHGAP4P98171 946 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 PLCB3Q01970 1234 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 PPP3CAQ08209 521 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 BFSP1Q12934 665 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 FAM84AQ96KN4 292 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 CFAP57Q96MR6 1250 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 TRIM55Q9BYV6 548 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 MMADHCQ9H3L0 296 aaPredicted RBP11.62□□□□□ -0.55
SNX20-201ENST00000300590 AGPAT3Q9NRZ7 376 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 DNAAF2Q9NVR5 837 aaKnown RBP11.62□□□□□ -0.55
SNX20-201ENST00000300590 KANSL3Q9P2N6 904 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 SLC17A7Q9P2U7 560 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 ZNF148Q9UQR1 794 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 UBXN2AP68543 259 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 PTK6Q13882 451 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 CTC1Q2NKJ3 1217 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 LIN52Q52LA3 116 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 ASPRV1Q53RT3 343 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 TBC1D9BQ66K14 1250 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 DHX38Q92620 1227 aaKnown RBP11.62□□□□□ -0.55
SNX20-201ENST00000300590 FHDC1Q9C0D6 1143 aaPredicted RBP11.62□□□□□ -0.55
SNX20-201ENST00000300590 TMEM117Q9H0C3 514 aa11.62□□□□□ -0.55
SNX20-201ENST00000300590 STX18Q9P2W9 335 aaKnown RBP11.62□□□□□ -0.55
SNX20-201ENST00000300590 TRPM3Q9HCF6 1732 aaPredicted RBP11.61□□□□□ -0.55
SNX20-201ENST00000300590 ATP6V1G1O75348 118 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 ZWINTO95229 277 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 KITP10721 976 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 KRT10P13645 584 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 KRT5P13647 590 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 GCAP28676 217 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 ABCD1P33897 745 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 CETN1Q12798 172 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 TCP10LQ8TDR4 215 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 EPS8L1Q8TE68 723 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 GRK7Q8WTQ7 553 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 SNRNP27Q8WVK2 155 aaKnown RBP11.61□□□□□ -0.55
SNX20-201ENST00000300590 JDP2Q8WYK2 163 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 EIF2AK1Q9BQI3 630 aaKnown RBP11.61□□□□□ -0.55
SNX20-201ENST00000300590 TMEM120AQ9BXJ8 343 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 BTG4Q9NY30 223 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 UBR2Q8IWV8 1755 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 FRMPD4Q14CM0 1322 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 FAM86B1E9PN63 330 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 ZBTB5O15062 677 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 PGM3O95394 542 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 FAM86B2P0C5J1 330 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 INHBCP55103 352 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 CMPK2Q5EBM0 449 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 SLFN12Q8IYM2 578 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 PSPC1Q8WXF1 523 aaKnown RBP11.61□□□□□ -0.55
SNX20-201ENST00000300590 PARVGQ9HBI0 331 aa11.61□□□□□ -0.55
SNX20-201ENST00000300590 TRAFD1O14545 582 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms