RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 B2RBV5 119 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 H3BRJ5 948 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 FSCN2O14926 492 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 SLC16A4O15374 487 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 MAP3K13O43283 966 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 BANF1O75531 89 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 ALAS1P13196 640 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 SLC34A1Q06495 639 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 ZYXQ15942 572 aaKnown RBP12.07□□□□□ -0.48
TRUB1-201ENST00000298746 SYCP2LQ5T4T6 812 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 MEX3CQ5U5Q3 659 aaKnown RBP12.07□□□□□ -0.48
TRUB1-201ENST00000298746 PADI6Q6TGC4 694 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 SYDE1Q6ZW31 735 aaPredicted RBP12.07□□□□□ -0.48
TRUB1-201ENST00000298746 CENPUQ71F23 418 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 CLNKQ7Z7G1 428 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 LINC00116Q8NCU8 138 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 ACSF2Q96CM8 615 aaPredicted RBP12.07□□□□□ -0.48
TRUB1-201ENST00000298746 SLC7A6OSQ96CW6 309 aaPredicted RBP12.07□□□□□ -0.48
TRUB1-201ENST00000298746 FAM84AQ96KN4 292 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 ACCSQ96QU6 501 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 LXNQ9BS40 222 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 TSSK1BQ9BXA7 367 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 VCX3BQ9H321 246 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 VCX3AQ9NNX9 186 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 GINM1Q9NU53 330 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 RAB20Q9NX57 234 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 HSPBP1Q9NZL4 362 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 ATF5Q9Y2D1 282 aaPredicted RBP12.07□□□□□ -0.48
TRUB1-201ENST00000298746 SLIT2O94813 1529 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 A0A1B0GUL6 1792 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 UBR2Q8IWV8 1755 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 MAGEA13PA6NCF6 341 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 C2orf71A6NGG8 1288 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 TBX3O15119 743 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 SLITRK3O94933 977 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 RTN3O95197 1032 aaPredicted RBP12.07□□□□□ -0.48
TRUB1-201ENST00000298746 NPTXRO95502 500 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 ASMTLO95671 621 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 MT-ND3P03897 115 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 ETS1P14921 441 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 PEX3P56589 373 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 GRAPQ13588 217 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 PDK4Q16654 411 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 CYP1B1Q16678 543 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 LRRC6Q86X45 466 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 ANKLE1Q8NAG6 615 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 PPP1R14CQ8TAE6 165 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 GRAPLQ8TC17 118 aaPredicted RBP12.07□□□□□ -0.48
TRUB1-201ENST00000298746 BTBD10Q9BSF8 475 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 ARL8BQ9NVJ2 186 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 SEL1LQ9UBV2 794 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 AGTPBP1Q9UPW5 1226 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 ALS2Q96Q42 1657 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 A0A1B0GVG6 124 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 ETS2P15036 469 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 FMO1Q01740 532 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 SHROOM1Q2M3G4 852 aaPredicted RBP12.06□□□□□ -0.48
TRUB1-201ENST00000298746 C1orf146Q5VVC0 180 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 RFWD2Q8NHY2 731 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 CADM1Q9BY67 442 aaKnown RBP12.06□□□□□ -0.48
TRUB1-201ENST00000298746 SYNCQ9H7C4 482 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 MARCOQ9UEW3 520 aaPredicted RBP12.06□□□□□ -0.48
TRUB1-201ENST00000298746 KRT1P04264 644 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 SPIRE1Q08AE8 756 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 ACSBG2Q5FVE4 666 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 TNFAIP8L3Q5GJ75 292 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 FAM102BQ5T8I3 360 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 LMBRD2Q68DH5 695 aaPredicted RBP12.06□□□□□ -0.48
TRUB1-201ENST00000298746 IZUMO2Q6UXV1 221 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 C1orf186Q6ZWK4 172 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 ARHGAP22Q7Z5H3 698 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 SLC25A41Q8N5S1 370 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 ZSWIM2Q8NEG5 633 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 VTI1AQ96AJ9 217 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 ZNF333Q96JL9 665 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 THTPAQ9BU02 230 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 POLR3CQ9BUI4 534 aaPredicted RBP12.06□□□□□ -0.48
TRUB1-201ENST00000298746 TMX4Q9H1E5 349 aaPredicted RBP12.06□□□□□ -0.48
TRUB1-201ENST00000298746 MANSC1Q9H8J5 431 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 DDX4Q9NQI0 724 aaKnown RBP12.06□□□□□ -0.48
TRUB1-201ENST00000298746 PSMC3IPQ9P2W1 217 aaPredicted RBP12.06□□□□□ -0.48
TRUB1-201ENST00000298746 ANGPTL2Q9UKU9 493 aa12.06□□□□□ -0.48
TRUB1-201ENST00000298746 F5H6K3 240 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 SORBS3O60504 671 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 PSMG1O95456 288 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 YY1P25490 414 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 GSTT1P30711 240 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 PHBP35232 272 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 LBRQ14739 615 aaKnown RBP12.05□□□□□ -0.48
TRUB1-201ENST00000298746 DOK7Q18PE1 504 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 SLC45A4Q5BKX6 768 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 DCUN1D2Q6PH85 259 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 MIER3Q7Z3K6 550 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 CBWD2Q8IUF1 395 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 TMEM206Q9H813 350 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 TOPORSQ9NS56 1045 aaPredicted RBP12.05□□□□□ -0.48
TRUB1-201ENST00000298746 SENP1Q9P0U3 644 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.05□□□□□ -0.48
TRUB1-201ENST00000298746 I3L4J1 428 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 CREB3O43889 395 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms