RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 PADI6Q6TGC4 694 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 TRIM74Q86UV6 250 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 TRIM73Q86UV7 250 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 DGKHQ86XP1 1220 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 MCPH1Q8NEM0 835 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 C9orf72Q96LT7 481 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 CNBD2Q96M20 576 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 PLA2G12BQ9BX93 195 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 AIM2O14862 343 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 VAMP7P51809 220 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 NFIXQ14938 502 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 LONRF1Q17RB8 773 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 SCN4BQ8IWT1 228 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 DHX40Q8IX18 779 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 RAD54LQ92698 747 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 C20orf96Q9NUD7 363 aaPredicted RBP11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 MAD2L2Q9UI95 211 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 DBR1Q9UK59 544 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 FAM32AQ9Y421 112 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 GSNP06396 782 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 SEC24CP53992 1094 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 MAPK6Q16659 721 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 THEMIS2Q5TEJ8 643 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 POTEAQ6S8J7 498 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 SH3GLB2Q9NR46 395 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 RAB21Q9UL25 225 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 ROBO1Q9Y6N7 1651 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 A0A1W2PQC6 194 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 SLC16A4O15374 487 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 SASH3O75995 380 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 TOB2Q14106 344 aaPredicted RBP11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 DAB2IPQ5VWQ8 1189 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 MTHFD1LQ6UB35 978 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 CCNI2Q6ZMN8 369 aaPredicted RBP11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 REXO1L1PQ8IX06 675 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 DCPSQ96C86 337 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 RBM15Q96T37 977 aaKnown RBP eCLIP11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 CORO1CQ9ULV4 474 aaPredicted RBP11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 MYO1GB0I1T2 1018 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 NBNO60934 754 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 TCN1P20061 433 aaPredicted RBP11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 OSBPP22059 807 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 SOX11P35716 441 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 SNAP25P60880 206 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 FAM102AQ5T9C2 384 aaPredicted RBP11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 TAS2R42Q7RTR8 314 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 TRIM51Q9BSJ1 452 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 BBS2Q9BXC9 721 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 SEPT3Q9UH03 358 aa11.28□□□□□ -0.6
PKNOX1-201ENST00000291547 FAM47DPA6NHR8 397 aa11.27□□□□□ -0.6
PKNOX1-201ENST00000291547 HUS1O60921 280 aa11.27□□□□□ -0.6
PKNOX1-201ENST00000291547 PDE5AO76074 875 aa11.27□□□□□ -0.6
PKNOX1-201ENST00000291547 FAM107AO95990 144 aa11.27□□□□□ -0.6
PKNOX1-201ENST00000291547 TBXAS1P24557 533 aaPredicted RBP11.27□□□□□ -0.6
PKNOX1-201ENST00000291547 MLH1P40692 756 aa11.27□□□□□ -0.6
PKNOX1-201ENST00000291547 AP3B2Q13367 1082 aa11.27□□□□□ -0.6
PKNOX1-201ENST00000291547 EFHC2Q5JST6 749 aa11.27□□□□□ -0.6
PKNOX1-201ENST00000291547 LRIG3Q6UXM1 1119 aa11.27□□□□□ -0.6
PKNOX1-201ENST00000291547 GUF1Q8N442 669 aaKnown RBP11.27□□□□□ -0.6
PKNOX1-201ENST00000291547 OR2W6PQ8NHA6 318 aa11.27□□□□□ -0.6
PKNOX1-201ENST00000291547 C17orf50Q8WW18 174 aa11.27□□□□□ -0.6
PKNOX1-201ENST00000291547 SH3KBP1Q96B97 665 aa11.27□□□□□ -0.6
PKNOX1-201ENST00000291547 ASIC4Q96FT7 647 aa11.27□□□□□ -0.6
PKNOX1-201ENST00000291547 SPON2Q9BUD6 331 aa11.27□□□□□ -0.6
PKNOX1-201ENST00000291547 DHX36Q9H2U1 1008 aaKnown RBP11.27□□□□□ -0.6
PKNOX1-201ENST00000291547 CCT8L1PA6NM43 557 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 HNRNPRO43390 633 aaKnown RBP11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 MYBL1P10243 752 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 MYBL2P10244 700 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 LRRC74AQ0VAA2 488 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 TBL3Q12788 808 aaKnown RBP11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 TRADDQ15628 312 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 MS4A14Q96JA4 679 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 GCNAQ96QF7 691 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 CAAP1Q9H8G2 361 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 TOPORSQ9NS56 1045 aaPredicted RBP11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 ZSCAN32Q9NX65 697 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 POTECB2RU33 542 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 IGF2BP3O00425 579 aaKnown RBP eCLIP11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 TRIM49P0CI25 452 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 TRIM49CP0CI26 452 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 CDK8P49336 464 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 EIF3EP60228 445 aaKnown RBP11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 ANO4Q32M45 955 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 OXER1Q8TDS5 423 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 UTYO14607 1347 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 GHRP10912 638 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 HMOX2P30519 316 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 C16orf89Q6UX73 402 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 FAM160B2Q86V87 743 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 CCDC103Q8IW40 242 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 CEP95Q96GE4 821 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 SH3GL1Q99961 368 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 MRPS26Q9BYN8 205 aaKnown RBP11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 CARD9Q9H257 536 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 PIH1D3Q9NQM4 214 aaKnown RBP11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 PI4KBQ9UBF8 816 aa11.27□□□□□ -0.61
PKNOX1-201ENST00000291547 LOC100653049A0A140TA62 436 aa11.26□□□□□ -0.61
PKNOX1-201ENST00000291547 DENND3A2RUS2 1198 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms