RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 CNMDO75829 334 aa13.72□□□□□ -0.21
ZIC3-201ENST00000287538 HLA-DRAP01903 254 aa13.72□□□□□ -0.21
ZIC3-201ENST00000287538 GHRP10912 638 aa13.72□□□□□ -0.21
ZIC3-201ENST00000287538 PDE6CP51160 858 aa13.72□□□□□ -0.21
ZIC3-201ENST00000287538 TTLL4Q14679 1199 aa13.72□□□□□ -0.21
ZIC3-201ENST00000287538 NOP9Q86U38 636 aaKnown RBP13.72□□□□□ -0.21
ZIC3-201ENST00000287538 CCDC197Q8NCU1 140 aa13.72□□□□□ -0.21
ZIC3-201ENST00000287538 MDM1Q8TC05 714 aa13.72□□□□□ -0.21
ZIC3-201ENST00000287538 KIAA1217Q5T5P2 1943 aa13.72□□□□□ -0.21
ZIC3-201ENST00000287538 UBE4BO95155 1302 aa13.72□□□□□ -0.21
ZIC3-201ENST00000287538 PSME4Q14997 1843 aa13.72□□□□□ -0.21
ZIC3-201ENST00000287538 RGPD3A6NKT7 1758 aaPredicted RBP13.72□□□□□ -0.21
ZIC3-201ENST00000287538 RGPD4Q7Z3J3 1758 aa13.72□□□□□ -0.21
ZIC3-201ENST00000287538 ATP2A1O14983 1001 aa13.72□□□□□ -0.21
ZIC3-201ENST00000287538 STBD1O95210 358 aa13.72□□□□□ -0.21
ZIC3-201ENST00000287538 HUNKP57058 714 aa13.72□□□□□ -0.21
ZIC3-201ENST00000287538 IFI16Q16666 785 aaKnown RBP13.72□□□□□ -0.21
ZIC3-201ENST00000287538 CDCA2Q69YH5 1023 aaPredicted RBP13.72□□□□□ -0.21
ZIC3-201ENST00000287538 TAX1BP1Q86VP1 789 aa13.72□□□□□ -0.21
ZIC3-201ENST00000287538 ZBTB8OSQ8IWT0 167 aa13.72□□□□□ -0.21
ZIC3-201ENST00000287538 SPDYE1Q8NFV5 336 aaPredicted RBP13.72□□□□□ -0.21
ZIC3-201ENST00000287538 RDM1Q8NG50 284 aa13.72□□□□□ -0.21
ZIC3-201ENST00000287538 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.72□□□□□ -0.21
ZIC3-201ENST00000287538 TSKSQ9UJT2 592 aa13.72□□□□□ -0.21
ZIC3-201ENST00000287538 MCM3APO60318 1980 aa13.71□□□□□ -0.21
ZIC3-201ENST00000287538 KRIT1O00522 736 aa13.71□□□□□ -0.21
ZIC3-201ENST00000287538 DIAPH2O60879 1101 aa13.71□□□□□ -0.21
ZIC3-201ENST00000287538 SLC25A27O95847 323 aa13.71□□□□□ -0.21
ZIC3-201ENST00000287538 EDN1P05305 212 aa13.71□□□□□ -0.21
ZIC3-201ENST00000287538 WEE2P0C1S8 567 aa13.71□□□□□ -0.21
ZIC3-201ENST00000287538 CD19P15391 556 aa13.71□□□□□ -0.21
ZIC3-201ENST00000287538 DRD4P21917 467 aa13.71□□□□□ -0.21
ZIC3-201ENST00000287538 LAMTOR4Q0VGL1 99 aa13.71□□□□□ -0.21
ZIC3-201ENST00000287538 TRPC3Q13507 836 aa13.71□□□□□ -0.21
ZIC3-201ENST00000287538 UAP1Q16222 522 aaPredicted RBP13.71□□□□□ -0.21
ZIC3-201ENST00000287538 MAPK6Q16659 721 aa13.71□□□□□ -0.21
ZIC3-201ENST00000287538 BRDTQ58F21 947 aaPredicted RBP13.71□□□□□ -0.21
ZIC3-201ENST00000287538 FAM133BQ5BKY9 247 aaKnown RBP13.71□□□□□ -0.21
ZIC3-201ENST00000287538 DPH5Q9H2P9 285 aa13.71□□□□□ -0.21
ZIC3-201ENST00000287538 ETAA1Q9NY74 926 aa13.71□□□□□ -0.21
ZIC3-201ENST00000287538 RNF14Q9UBS8 474 aa13.71□□□□□ -0.21
ZIC3-201ENST00000287538 COL11A1P12107 1806 aaPredicted RBP13.71□□□□□ -0.21
ZIC3-201ENST00000287538 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.71□□□□□ -0.22
ZIC3-201ENST00000287538 DYNC1LI2O43237 492 aaPredicted RBP13.71□□□□□ -0.22
ZIC3-201ENST00000287538 GJB6O95452 261 aa13.71□□□□□ -0.22
ZIC3-201ENST00000287538 PRKCBP05771 671 aa13.71□□□□□ -0.22
ZIC3-201ENST00000287538 TNNC1P63316 161 aa13.71□□□□□ -0.22
ZIC3-201ENST00000287538 RNF10Q8N5U6 811 aaKnown RBP13.71□□□□□ -0.22
ZIC3-201ENST00000287538 SAMD3Q8N6K7 520 aa13.71□□□□□ -0.22
ZIC3-201ENST00000287538 C2orf69Q8N8R5 385 aa13.71□□□□□ -0.22
ZIC3-201ENST00000287538 TPCN2Q8NHX9 752 aa13.71□□□□□ -0.22
ZIC3-201ENST00000287538 AGAP11Q8TF27 550 aa13.71□□□□□ -0.22
ZIC3-201ENST00000287538 NLRP7Q8WX94 980 aa13.71□□□□□ -0.22
ZIC3-201ENST00000287538 LRRC45Q96CN5 670 aa13.71□□□□□ -0.22
ZIC3-201ENST00000287538 CPB2Q96IY4 423 aa13.71□□□□□ -0.22
ZIC3-201ENST00000287538 GBA2Q9HCG7 927 aaPredicted RBP13.71□□□□□ -0.22
ZIC3-201ENST00000287538 MAFBQ9Y5Q3 323 aaPredicted RBP13.71□□□□□ -0.22
ZIC3-201ENST00000287538 INSRRP14616 1297 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 JAM2P57087 298 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 CCNA1P78396 465 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 KRT71Q3SY84 523 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 ZNF568Q3ZCX4 644 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 DPY19L2P1Q6NXN4 242 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 ANKS4BQ8N8V4 417 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 ZNF516Q92618 1163 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 PCDHB18PQ96TA0 734 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 STRA6Q9BX79 667 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 IMPG2Q9BZV3 1241 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 MTMR12Q9C0I1 747 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 UMODL1Q5DID0 1318 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 EIF4E1BA6NMX2 242 aaKnown RBP13.7□□□□□ -0.22
ZIC3-201ENST00000287538 H0YGN5 161 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 KIF4AO95239 1232 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 FGGP02679 453 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 ITGA4P13612 1032 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 CYP2B6P20813 491 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 FOXR2Q6PJQ5 311 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 SLC9A9Q8IVB4 645 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 CHMP6Q96FZ7 201 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 ZNF570Q96NI8 536 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 GPR20Q99678 358 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 TMEM8AQ9HCN3 771 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 NOP53Q9NZM5 478 aaKnown RBP13.7□□□□□ -0.22
ZIC3-201ENST00000287538 CPSF2Q9P2I0 782 aaKnown RBP13.7□□□□□ -0.22
ZIC3-201ENST00000287538 FBXL5Q9UKA1 691 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 NFS1Q9Y697 457 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 NFASCO94856 1347 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 GTPBP10A4D1E9 387 aaKnown RBP13.7□□□□□ -0.22
ZIC3-201ENST00000287538 RBBP5Q15291 538 aaKnown RBP13.7□□□□□ -0.22
ZIC3-201ENST00000287538 CELF3Q5SZQ8 465 aaKnown RBP13.7□□□□□ -0.22
ZIC3-201ENST00000287538 CRELD2Q6UXH1 353 aaPredicted RBP13.7□□□□□ -0.22
ZIC3-201ENST00000287538 SENP7Q9BQF6 1050 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 HAPLN2Q9GZV7 340 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 NMRK2Q9NPI5 230 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 PNMA3Q9UL41 463 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 PTPRJQ12913 1337 aa13.7□□□□□ -0.22
ZIC3-201ENST00000287538 PJA2O43164 708 aa13.69□□□□□ -0.22
ZIC3-201ENST00000287538 STAM2O75886 525 aa13.69□□□□□ -0.22
ZIC3-201ENST00000287538 GHRHRQ02643 423 aa13.69□□□□□ -0.22
ZIC3-201ENST00000287538 GPAT2Q6NUI2 795 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms