RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 PITPNM3Q9BZ71 974 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 WDR11Q9BZH6 1224 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 OSGEPQ9NPF4 335 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 CHCHD3Q9NX63 227 aaKnown RBP11.18□□□□□ -0.62
ERCC3-201ENST00000285398 NKIRAS1Q9NYS0 192 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 NVLO15381 856 aaKnown RBP11.17□□□□□ -0.62
ERCC3-201ENST00000285398 TMEM253P0C7T8 217 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 ARP10275 920 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 ITGB5P18084 799 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 POLGP54098 1239 aaPredicted RBP11.17□□□□□ -0.62
ERCC3-201ENST00000285398 YARSP54577 528 aaKnown RBP11.17□□□□□ -0.62
ERCC3-201ENST00000285398 STRN3Q13033 797 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 RNF220Q5VTB9 566 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 CYFIP1Q7L576 1253 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 EEPD1Q7L9B9 569 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 FRMD5Q7Z6J6 570 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 SESTD1Q86VW0 696 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 KLHL23Q8NBE8 558 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 FAM136AQ96C01 138 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 BCAS3Q9H6U6 928 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 ASTN1O14525 1302 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 PARP14Q460N5 1801 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 MAPK13O15264 365 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 MSH4O15457 936 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 FOSP01100 380 aaPredicted RBP11.17□□□□□ -0.62
ERCC3-201ENST00000285398 BRAFP15056 766 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 NR2F2P24468 414 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 FKBP1BP68106 108 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 MRPS9P82933 396 aaKnown RBP11.17□□□□□ -0.62
ERCC3-201ENST00000285398 HYIQ5T013 277 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 PPP1R21Q6ZMI0 780 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 LONP2Q86WA8 852 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 OLIG1Q8TAK6 271 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 ART4Q93070 314 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 ERP27Q96DN0 273 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 GLT8D2Q9H1C3 349 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 MYLK2Q9H1R3 596 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 ACAD9Q9H845 621 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 MLXIPLQ9NP71 852 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 PFASO15067 1338 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 MROH7Q68CQ1 1323 aa11.17□□□□□ -0.62
ERCC3-201ENST00000285398 IGLV3-22A0A075B6J6 115 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 TESPA1A2RU30 521 aaPredicted RBP11.16□□□□□ -0.62
ERCC3-201ENST00000285398 MAP3K13O43283 966 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 DCTN3O75935 186 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 GGPS1O95749 300 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 PYGLP06737 847 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 CETPP11597 493 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 XRCC5P13010 732 aaKnown RBP11.16□□□□□ -0.62
ERCC3-201ENST00000285398 GM2AP17900 193 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 VHLP40337 213 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 GTF2A2P52657 109 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 CALCOCO2Q13137 446 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 ZNF211Q13398 564 aaPredicted RBP11.16□□□□□ -0.62
ERCC3-201ENST00000285398 EPHA7Q15375 998 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 ARHGEF16Q5VV41 709 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 CGB2Q6NT52 195 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 DNAJC14Q6Y2X3 702 aaPredicted RBP11.16□□□□□ -0.62
ERCC3-201ENST00000285398 CCDC25Q86WR0 208 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 RASAL3Q86YV0 1011 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 ANKLE1Q8NAG6 615 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 IFT43Q96FT9 208 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 TBC1D10AQ9BXI6 508 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 FAM192AQ9GZU8 254 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 SIX2Q9NPC8 291 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 AJAP1Q9UKB5 411 aaPredicted RBP11.16□□□□□ -0.62
ERCC3-201ENST00000285398 PCDHA12Q9UN75 941 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 USP20Q9Y2K6 914 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 USH1CQ9Y6N9 552 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 PASKQ96RG2 1323 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 KDM3AQ9Y4C1 1321 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 H0Y3Z8 333 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 PDLIM1O00151 329 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 TARSP26639 723 aaKnown RBP11.16□□□□□ -0.62
ERCC3-201ENST00000285398 RANBP1P43487 201 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 HERC4Q5GLZ8 1057 aaPredicted RBP11.16□□□□□ -0.62
ERCC3-201ENST00000285398 UBAP2Q5T6F2 1119 aaKnown RBP11.16□□□□□ -0.62
ERCC3-201ENST00000285398 CYP4F22Q6NT55 531 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 CCDC137Q6PK04 289 aaKnown RBP11.16□□□□□ -0.62
ERCC3-201ENST00000285398 MCF2L2Q86YR7 1114 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 UBL4BQ8N7F7 174 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 SLC30A5Q8TAD4 765 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 LRRC8CQ8TDW0 803 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 MAIP1Q8WWC4 291 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 ZNF333Q96JL9 665 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 HAO1Q9UJM8 370 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 STARD13Q9Y3M8 1113 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 MIF4GDA9UHW6 222 aaKnown RBP11.16□□□□□ -0.62
ERCC3-201ENST00000285398 CREB1P16220 341 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 STAT1P42224 750 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 IL9RQ01113 521 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 SP4Q02446 784 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 CYP4A11Q02928 519 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 PGM5Q15124 567 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 CCDC6Q16204 474 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 CEP55Q53EZ4 464 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 LNX1Q8TBB1 728 aaPredicted RBP11.16□□□□□ -0.62
ERCC3-201ENST00000285398 ETNPPLQ8TBG4 499 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 BORCS6Q96GS4 357 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 NT5C3AQ9H0P0 336 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms