RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CCDC62Q6P9F0 684 aa19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 DHX37Q8IY37 1157 aaKnown RBP19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 SYT11Q9BT88 431 aa19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 NRBP2Q9NSY0 501 aa19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 K7ERI5 159 aa19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 HARSP12081 509 aaKnown RBP19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 MKRN4PQ13434 485 aaPredicted RBP19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 PRPF4BQ13523 1007 aaKnown RBP19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 ATXN2LQ8WWM7 1075 aaKnown RBP19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 PRPF31Q8WWY3 499 aaKnown RBP19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 MFSD14AQ96MC6 490 aa19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 KREMEN1Q96MU8 473 aa19.55■□□□□ 0.72
PDLIM3-201ENST00000284767 SHBGP04278 402 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 HSPA6P17066 643 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 STRN3Q13033 797 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 KRT39Q6A163 491 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 SV2AQ7L0J3 742 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 ARMCX2Q7L311 632 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 PIGWQ7Z7B1 504 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 CEP57Q86XR8 500 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 JAMLQ86YT9 394 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 CCDC134Q9H6E4 229 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 DONSONQ9NYP3 566 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 ZBTB42B2RXF5 422 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 AGTP01019 485 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 ABCB4P21439 1286 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 NAMPTP43490 491 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 ADCY2Q08462 1091 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 GPRC5AQ8NFJ5 357 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 ZNF516Q92618 1163 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 SCLT1Q96NL6 688 aa19.54■□□□□ 0.72
PDLIM3-201ENST00000284767 KIAA0391O15091 583 aaKnown RBP19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 ATP2C2O75185 946 aa19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 CALCAP01258 141 aa19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 ADORA2AP29274 412 aa19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 C6orf118Q5T5N4 469 aa19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 ZDHHC24Q6UX98 284 aa19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 DHX38Q92620 1227 aaKnown RBP19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 TMEM109Q9BVC6 243 aa19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 ADAM7Q9H2U9 754 aa19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 ERVK-5Q9HDB9 667 aa19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 PARP2Q9UGN5 583 aa19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 SLC12A4Q9UP95 1085 aa19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 PTPRJQ12913 1337 aa19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 P4HA2O15460 535 aa19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 RGS16O15492 202 aaPredicted RBP19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 MAFO75444 373 aaPredicted RBP19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 SRGAP2CP0DJJ0 459 aa19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 GARTP22102 1010 aa19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 SCARA3Q6AZY7 606 aa19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 SELENOSQ9BQE4 189 aa19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 STMN4Q9H169 189 aaPredicted RBP19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 TMEM8AQ9HCN3 771 aa19.53■□□□□ 0.72
PDLIM3-201ENST00000284767 ANKRD62A6NC57 917 aa19.52■□□□□ 0.72
PDLIM3-201ENST00000284767 PLTPP55058 493 aa19.52■□□□□ 0.72
PDLIM3-201ENST00000284767 HADHBP55084 474 aaKnown RBP19.52■□□□□ 0.72
PDLIM3-201ENST00000284767 ELF3P78545 371 aaPredicted RBP19.52■□□□□ 0.72
PDLIM3-201ENST00000284767 CRELD2Q6UXH1 353 aaPredicted RBP19.52■□□□□ 0.72
PDLIM3-201ENST00000284767 RNF25Q96BH1 459 aaPredicted RBP19.52■□□□□ 0.72
PDLIM3-201ENST00000284767 MPHOSPH6Q99547 160 aaKnown RBP19.52■□□□□ 0.72
PDLIM3-201ENST00000284767 RRAGCQ9HB90 399 aa19.52■□□□□ 0.72
PDLIM3-201ENST00000284767 AGO2Q9UKV8 859 aaKnown RBP19.52■□□□□ 0.72
PDLIM3-201ENST00000284767 PNMA3Q9UL41 463 aa19.52■□□□□ 0.72
PDLIM3-201ENST00000284767 PHF2O75151 1096 aa19.52■□□□□ 0.72
PDLIM3-201ENST00000284767 SGPL1O95470 568 aa19.52■□□□□ 0.72
PDLIM3-201ENST00000284767 CHRNA3P32297 505 aa19.52■□□□□ 0.72
PDLIM3-201ENST00000284767 COPB2P35606 906 aa19.52■□□□□ 0.72
PDLIM3-201ENST00000284767 KCTD19Q17RG1 926 aaPredicted RBP19.52■□□□□ 0.72
PDLIM3-201ENST00000284767 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.52■□□□□ 0.72
PDLIM3-201ENST00000284767 SAMD15Q9P1V8 674 aa19.52■□□□□ 0.72
PDLIM3-201ENST00000284767 TRPC6Q9Y210 931 aa19.52■□□□□ 0.72
PDLIM3-201ENST00000284767 MIF4GDA9UHW6 222 aaKnown RBP19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 PODXLO00592 558 aa19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 CYP26A1O43174 497 aa19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 RFC5P40937 340 aa19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 KIF22Q14807 665 aa19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 RHOT2Q8IXI1 618 aa19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 FBXL13Q8NEE6 735 aa19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 FBXO25Q8TCJ0 367 aa19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 N4BP2L2Q92802 583 aaPredicted RBP19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 NSRP1Q9H0G5 558 aaKnown RBP19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 GBA2Q9HCG7 927 aaPredicted RBP19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 INTS9Q9NV88 658 aaKnown RBP19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 RAB20Q9NX57 234 aa19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 MTRF1LQ9UGC7 380 aaKnown RBP19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 CHORDC1Q9UHD1 332 aaPredicted RBP19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 SNX24Q9Y343 169 aa19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 CELF2O95319 508 aaKnown RBP19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 CETPP11597 493 aa19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 TNFAIP3P21580 790 aa19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 SLC47A2Q86VL8 602 aa19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 HELQQ8TDG4 1101 aa19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 TMC2Q8TDI7 906 aa19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 PSPC1Q8WXF1 523 aaKnown RBP19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 ARHGEF26Q96DR7 871 aa19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 PTPN18Q99952 460 aa19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 RNPEPQ9H4A4 650 aa19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 GRHL1Q9NZI5 618 aa19.51■□□□□ 0.71
PDLIM3-201ENST00000284767 EXTL3O43909 919 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms