RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 ZNF516Q92618 1163 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 ZNF560Q96MR9 790 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 THAP9Q9H5L6 903 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 TLR9Q9NR96 1032 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 LMCD1Q9NZU5 365 aa17.79■□□□□ 0.44
SNRPF-201ENST00000266735 CHD9Q3L8U1 2897 aa17.78■□□□□ 0.44
SNRPF-201ENST00000266735 SOD2P04179 222 aa17.78■□□□□ 0.44
SNRPF-201ENST00000266735 KRT19P08727 400 aa17.78■□□□□ 0.44
SNRPF-201ENST00000266735 POLR2BP30876 1174 aaKnown RBP17.78■□□□□ 0.44
SNRPF-201ENST00000266735 GTF2H1P32780 548 aa17.78■□□□□ 0.44
SNRPF-201ENST00000266735 BMS1Q14692 1282 aaKnown RBP17.78■□□□□ 0.44
SNRPF-201ENST00000266735 ANO6Q4KMQ2 910 aa17.78■□□□□ 0.44
SNRPF-201ENST00000266735 DCAF17Q5H9S7 520 aaPredicted RBP17.78■□□□□ 0.44
SNRPF-201ENST00000266735 C1orf220Q5T0J3 134 aa17.78■□□□□ 0.44
SNRPF-201ENST00000266735 PDE12Q6L8Q7 609 aaKnown RBP17.78■□□□□ 0.44
SNRPF-201ENST00000266735 CD300LGQ6UXG3 332 aa17.78■□□□□ 0.44
SNRPF-201ENST00000266735 FAM114A1Q8IWE2 563 aa17.78■□□□□ 0.44
SNRPF-201ENST00000266735 VPS52Q8N1B4 723 aa17.78■□□□□ 0.44
SNRPF-201ENST00000266735 TMEM130Q8N3G9 435 aa17.78■□□□□ 0.44
SNRPF-201ENST00000266735 CXorf38Q8TB03 319 aa17.78■□□□□ 0.44
SNRPF-201ENST00000266735 FAM84AQ96KN4 292 aa17.78■□□□□ 0.44
SNRPF-201ENST00000266735 GAS2L1Q99501 681 aaPredicted RBP17.78■□□□□ 0.44
SNRPF-201ENST00000266735 HERC2P3Q9BVR0 1158 aa17.78■□□□□ 0.44
SNRPF-201ENST00000266735 VN1R3Q9BXE9 311 aa17.78■□□□□ 0.44
SNRPF-201ENST00000266735 GPR62Q9BZJ7 368 aa17.78■□□□□ 0.44
SNRPF-201ENST00000266735 SIX4Q9UIU6 781 aa17.78■□□□□ 0.44
SNRPF-201ENST00000266735 AGAP1Q9UPQ3 857 aa17.78■□□□□ 0.44
SNRPF-201ENST00000266735 GBF1Q92538 1859 aa17.78■□□□□ 0.44
SNRPF-201ENST00000266735 PPEF2O14830 753 aa17.77■□□□□ 0.43
SNRPF-201ENST00000266735 C4BPAP04003 597 aaKnown RBP17.77■□□□□ 0.43
SNRPF-201ENST00000266735 TRIM49P0CI25 452 aa17.77■□□□□ 0.43
SNRPF-201ENST00000266735 TRIM49CP0CI26 452 aa17.77■□□□□ 0.43
SNRPF-201ENST00000266735 IGFBP6P24592 240 aaPredicted RBP17.77■□□□□ 0.43
SNRPF-201ENST00000266735 DNAJB1P25685 340 aa17.77■□□□□ 0.43
SNRPF-201ENST00000266735 AARSP49588 968 aaKnown RBP eCLIP17.77■□□□□ 0.43
SNRPF-201ENST00000266735 TAF6P49848 677 aa17.77■□□□□ 0.43
SNRPF-201ENST00000266735 MYL5Q02045 173 aa17.77■□□□□ 0.43
SNRPF-201ENST00000266735 BIRC3Q13489 604 aa17.77■□□□□ 0.43
SNRPF-201ENST00000266735 CAMK1Q14012 370 aa17.77■□□□□ 0.43
SNRPF-201ENST00000266735 ZACNQ401N2 412 aa17.77■□□□□ 0.43
SNRPF-201ENST00000266735 TCERG1LQ5VWI1 586 aa17.77■□□□□ 0.43
SNRPF-201ENST00000266735 MRPL38Q96DV4 380 aaKnown RBP17.77■□□□□ 0.43
SNRPF-201ENST00000266735 CDX2Q99626 313 aaPredicted RBP17.77■□□□□ 0.43
SNRPF-201ENST00000266735 TCF25Q9BQ70 676 aa17.77■□□□□ 0.43
SNRPF-201ENST00000266735 BPIFA3Q9BQP9 254 aa17.77■□□□□ 0.43
SNRPF-201ENST00000266735 ZBP1Q9H171 429 aa17.77■□□□□ 0.43
SNRPF-201ENST00000266735 NGRNQ9NPE2 291 aaKnown RBP17.77■□□□□ 0.43
SNRPF-201ENST00000266735 MTMR10Q9NXD2 777 aa17.77■□□□□ 0.43
SNRPF-201ENST00000266735 NFE2L3Q9Y4A8 694 aa17.77■□□□□ 0.43
SNRPF-201ENST00000266735 RALGAPA2Q2PPJ7 1873 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 PHACTR2O75167 634 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 CTSAP10619 480 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 POU3F3P20264 500 aaPredicted RBP17.76■□□□□ 0.43
SNRPF-201ENST00000266735 BRCC3P46736 316 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 LILRA4P59901 499 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 PPP3CAQ08209 521 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 MYO1EQ12965 1108 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 TRPC3Q13507 836 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 USP41Q3LFD5 358 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 SV2CQ496J9 727 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 FAM171A1Q5VUB5 890 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 TDRD10Q5VZ19 366 aaKnown RBP17.76■□□□□ 0.43
SNRPF-201ENST00000266735 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.76■□□□□ 0.43
SNRPF-201ENST00000266735 C15orf39Q6ZRI6 1047 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 SV2AQ7L0J3 742 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 TMC7Q7Z402 723 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 MICAL1Q8TDZ2 1067 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 SLC35C1Q96A29 364 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 SUSD3Q96L08 255 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 CNOT6LQ96LI5 555 aaKnown RBP17.76■□□□□ 0.43
SNRPF-201ENST00000266735 TMEM8AQ9HCN3 771 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 ENTPD7Q9NQZ7 604 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 CHST7Q9NS84 486 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 MAGEC2Q9UBF1 373 aaPredicted RBP17.76■□□□□ 0.43
SNRPF-201ENST00000266735 SSX2IPQ9Y2D8 614 aa17.76■□□□□ 0.43
SNRPF-201ENST00000266735 ARHGEF37A1IGU5 675 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 KPNA7A9QM74 516 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 FSCN2O14926 492 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 SYN3O14994 580 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 CAVIN2O95810 425 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 URODP06132 367 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 GCLMP48507 274 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 GLUD2P49448 558 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 MXI1P50539 228 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 ERVFC1P60507 584 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 ADGRE1Q14246 886 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 SMC1AQ14683 1233 aaKnown RBP17.75■□□□□ 0.43
SNRPF-201ENST00000266735 TIGD5Q53EQ6 642 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 KRT39Q6A163 491 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 KIAA1841Q6NSI8 718 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 DSTYKQ6XUX3 929 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 TAS1R1Q7RTX1 841 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 IRF2BP1Q8IU81 584 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 TRIM59Q8IWR1 403 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 GPR65Q8IYL9 337 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 GUCD1Q96NT3 240 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 TTPALQ9BTX7 342 aa17.75■□□□□ 0.43
SNRPF-201ENST00000266735 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.75■□□□□ 0.43
SNRPF-201ENST00000266735 I3L4J1 428 aa17.74■□□□□ 0.43
SNRPF-201ENST00000266735 M0QZQ0 153 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms