RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 PRPF31Q8WWY3 499 aaKnown RBP9.29□□□□□ -0.92
VAPB-201ENST00000265619 FAM161BQ96MY7 647 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 SERPINB12Q96P63 405 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 ARPC5LQ9BPX5 153 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 STMN4Q9H169 189 aaPredicted RBP9.29□□□□□ -0.92
VAPB-201ENST00000265619 ALG13Q9NP73 1137 aaKnown RBP9.29□□□□□ -0.92
VAPB-201ENST00000265619 ACP6Q9NPH0 428 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 EMILIN3Q9NT22 766 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 BCS1LQ9Y276 419 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 PPME1Q9Y570 386 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 COL4A3BPQ9Y5P4 624 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 SLC5A2P31639 672 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 STT3AP46977 705 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 MTTPP55157 894 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 MKRN3Q13064 507 aaKnown RBP9.29□□□□□ -0.92
VAPB-201ENST00000265619 KLC3Q6P597 504 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 EPM2AIP1Q7L775 607 aaPredicted RBP9.29□□□□□ -0.92
VAPB-201ENST00000265619 LRRC47Q8N1G4 583 aaKnown RBP9.29□□□□□ -0.92
VAPB-201ENST00000265619 DEPTORQ8TB45 409 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 STMN2Q93045 179 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 ZSCAN10Q96SZ4 725 aaPredicted RBP9.29□□□□□ -0.92
VAPB-201ENST00000265619 EDEM3Q9BZQ6 932 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 TTC7AQ9ULT0 858 aaPredicted RBP9.29□□□□□ -0.92
VAPB-201ENST00000265619 FAM187AA6NFU0 413 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 FOXD2O60548 495 aaPredicted RBP9.28□□□□□ -0.92
VAPB-201ENST00000265619 ADAM23O75077 832 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 DCTN3O75935 186 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 PDGFRBP09619 1106 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 CRABP2P29373 138 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 PIK3CAP42336 1068 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 DRG2P55039 364 aaKnown RBP9.28□□□□□ -0.92
VAPB-201ENST00000265619 PPATQ06203 517 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 STRN3Q13033 797 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 IKQ13123 557 aaPredicted RBP9.28□□□□□ -0.92
VAPB-201ENST00000265619 SLC35G1Q2M3R5 365 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 NADK2Q4G0N4 442 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 HP1BP3Q5SSJ5 553 aaPredicted RBP9.28□□□□□ -0.92
VAPB-201ENST00000265619 ARHGAP27Q6ZUM4 889 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 GLYCTKQ8IVS8 523 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 BLIDQ8IZY5 108 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 DIS3LQ8TF46 1054 aaKnown RBP9.28□□□□□ -0.92
VAPB-201ENST00000265619 GJA10Q969M2 543 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 C9orf72Q96LT7 481 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 PRICKLE1Q96MT3 831 aaPredicted RBP9.28□□□□□ -0.92
VAPB-201ENST00000265619 ARMC7Q9H6L4 198 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 NKIRAS1Q9NYS0 192 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 BTBD7Q9P203 1132 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 RASA4BC9J798 803 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 CYP26A1O43174 497 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 RASA4O43374 803 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 PHF2O75151 1096 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 SERPINB7O75635 380 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 H2AFZP0C0S5 128 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 ALAS1P13196 640 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 GCAP28676 217 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 CLCN2P51788 898 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 GSTO1P78417 241 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 GRB10Q13322 594 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 MYLK3Q32MK0 819 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 CRY2Q49AN0 593 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 CCDC92Q53HC0 331 aaPredicted RBP9.28□□□□□ -0.92
VAPB-201ENST00000265619 RIPOR1Q6ZS17 1223 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 ARHGEF18Q6ZSZ5 1173 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 H2AFVQ71UI9 128 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 SDR16C5Q8N3Y7 309 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 CERS5Q8N5B7 392 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 ATP11CQ8NB49 1132 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 FLAD1Q8NFF5 587 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 DENND1AQ8TEH3 1009 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 CTNNBL1Q8WYA6 563 aaPredicted RBP9.28□□□□□ -0.92
VAPB-201ENST00000265619 JDP2Q8WYK2 163 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 AGAP3Q96P47 875 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 ROPN1BQ9BZX4 212 aaPredicted RBP9.28□□□□□ -0.92
VAPB-201ENST00000265619 GRIP2Q9C0E4 1043 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 MIS12Q9H081 205 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 ROPN1Q9HAT0 212 aaPredicted RBP9.28□□□□□ -0.92
VAPB-201ENST00000265619 PTTG2Q9NZH5 202 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 HEY2Q9UBP5 337 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 MTRF1LQ9UGC7 380 aaKnown RBP9.28□□□□□ -0.92
VAPB-201ENST00000265619 PCDHA6Q9UN73 950 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 PCDHA8Q9Y5H6 950 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 FRMPD2Q68DX3 1309 aaPredicted RBP9.28□□□□□ -0.92
VAPB-201ENST00000265619 A0A0G2JND7 137 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 M0R2N6 131 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 FGFR1OPO95684 399 aaKnown RBP9.28□□□□□ -0.92
VAPB-201ENST00000265619 UCHL3P15374 230 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 DPEP1P16444 411 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 TRAPPC10P48553 1259 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 GEMIN4P57678 1058 aaKnown RBP9.28□□□□□ -0.92
VAPB-201ENST00000265619 RHBDL3P58872 404 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 DHX34Q14147 1143 aaKnown RBP9.28□□□□□ -0.92
VAPB-201ENST00000265619 ECM1Q16610 540 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 TRIM59Q8IWR1 403 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 CPNE9Q8IYJ1 553 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 ANKRD13AQ8IZ07 590 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 SLC7A5P1Q8MH63 180 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 MCUR1Q96AQ8 359 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 OLFM3Q96PB7 478 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 PNMA5Q96PV4 448 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 RBM38Q9H0Z9 239 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms