RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ATP9AO75110 1047 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 TCF7P36402 384 aaPredicted RBP20.99■□□□□ 0.95
CSPG5-201ENST00000264723 C6orf163Q5TEZ5 329 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 DARS2Q6PI48 645 aaKnown RBP20.99■□□□□ 0.95
CSPG5-201ENST00000264723 LRRC57Q8N9N7 239 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 VAV3Q9UKW4 847 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 HEY1Q9Y5J3 304 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 GTPBP10A4D1E9 387 aaKnown RBP20.99■□□□□ 0.95
CSPG5-201ENST00000264723 PHKA2P46019 1235 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 NOP14P78316 857 aaKnown RBP20.99■□□□□ 0.95
CSPG5-201ENST00000264723 TATDN1Q6P1N9 297 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 SGSM3Q96HU1 749 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 KIAA1683Q9H0B3 1180 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 SNX25Q9H3E2 840 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 UVRAGQ9P2Y5 699 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 GTF3C4Q9UKN8 822 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.99■□□□□ 0.95
CSPG5-201ENST00000264723 USP15Q9Y4E8 981 aaPredicted RBP20.99■□□□□ 0.95
CSPG5-201ENST00000264723 UBE4BO95155 1302 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 INHBAP08476 426 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 CCDC62Q6P9F0 684 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 CFAP36Q96G28 342 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 HES6Q96HZ4 224 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 MCEEQ96PE7 176 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 MIS12Q9H081 205 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 MYH6P13533 1939 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 A6NJR5 290 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 TAF12Q16514 161 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 RBBP8NLQ8NC74 664 aaPredicted RBP20.98■□□□□ 0.95
CSPG5-201ENST00000264723 P2RX7Q99572 595 aaKnown RBP20.98■□□□□ 0.95
CSPG5-201ENST00000264723 C10orf88Q9H8K7 445 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 SCINQ9Y6U3 715 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 GRIN2DO15399 1336 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 CYP3A7-CYP3A51PA0A087WV96 503 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 MED7O43513 233 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 UBOX5O94941 541 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 RFX1P22670 979 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 CYP3A7P24462 503 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 CYP4A22Q5TCH4 519 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 MAP7D3Q8IWC1 876 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 TMEM8AQ9HCN3 771 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 L3MBTL1Q9Y468 752 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 PCDHA2Q9Y5H9 948 aa20.98■□□□□ 0.95
CSPG5-201ENST00000264723 KIAA0391O15091 583 aaKnown RBP20.97■□□□□ 0.95
CSPG5-201ENST00000264723 BAG2O95816 211 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 CDR2Q01850 454 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 KCNT1Q5JUK3 1230 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 HYIQ5T013 277 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 PRPSAP2O60256 369 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 PEX10O60683 326 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 TJP3O95049 919 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 MT-ND3P03897 115 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 PHBP35232 272 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 GCKP35557 465 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 CLCN3P51790 818 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 CEP128Q6ZU80 1094 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 CCDC110Q8TBZ0 833 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 EPS8L1Q8TE68 723 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 FAM129AQ9BZQ8 928 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 M0QYV0 167 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 IGF2BP3O00425 579 aaKnown RBP eCLIP20.97■□□□□ 0.95
CSPG5-201ENST00000264723 DIAPH2O60879 1101 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 ADRB2P07550 413 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 HOXD13P35453 343 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 PCNX4Q63HM2 1172 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 ACAD10Q6JQN1 1059 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 CENPUQ71F23 418 aa20.97■□□□□ 0.95
CSPG5-201ENST00000264723 ABCD1P33897 745 aa20.96■□□□□ 0.95
CSPG5-201ENST00000264723 LMNB2Q03252 620 aa20.96■□□□□ 0.95
CSPG5-201ENST00000264723 MUM1Q2TAK8 710 aa20.96■□□□□ 0.95
CSPG5-201ENST00000264723 SLC24A3Q9HC58 644 aa20.96■□□□□ 0.95
CSPG5-201ENST00000264723 NEU2Q9Y3R4 380 aa20.96■□□□□ 0.95
CSPG5-201ENST00000264723 RIPK2O43353 540 aa20.96■□□□□ 0.95
CSPG5-201ENST00000264723 GRAP2O75791 330 aa20.96■□□□□ 0.95
CSPG5-201ENST00000264723 STK10O94804 968 aaKnown RBP20.96■□□□□ 0.95
CSPG5-201ENST00000264723 SAT1P21673 171 aa20.96■□□□□ 0.95
CSPG5-201ENST00000264723 SPARCL1Q14515 664 aa20.96■□□□□ 0.95
CSPG5-201ENST00000264723 PCDHB18PQ96TA0 734 aa20.96■□□□□ 0.95
CSPG5-201ENST00000264723 TRAIPQ9BWF2 469 aa20.96■□□□□ 0.95
CSPG5-201ENST00000264723 MTFR1LQ9H019 292 aa20.96■□□□□ 0.95
CSPG5-201ENST00000264723 WRAP73Q9P2S5 460 aaPredicted RBP20.96■□□□□ 0.95
CSPG5-201ENST00000264723 MCF2LO15068 1137 aa20.96■□□□□ 0.95
CSPG5-201ENST00000264723 DYNC1LI2O43237 492 aaPredicted RBP20.96■□□□□ 0.95
CSPG5-201ENST00000264723 SHOX2O60902 331 aaPredicted RBP20.96■□□□□ 0.95
CSPG5-201ENST00000264723 RARGP13631 454 aa20.96■□□□□ 0.95
CSPG5-201ENST00000264723 JAG1P78504 1218 aa20.96■□□□□ 0.95
CSPG5-201ENST00000264723 SURF1Q15526 300 aa20.96■□□□□ 0.95
CSPG5-201ENST00000264723 GPRASP2Q96D09 838 aa20.96■□□□□ 0.95
CSPG5-201ENST00000264723 MARF1Q9Y4F3 1742 aaKnown RBP20.96■□□□□ 0.95
CSPG5-201ENST00000264723 ASTN2O75129 1339 aaPredicted RBP20.95■□□□□ 0.95
CSPG5-201ENST00000264723 MAFGO15525 162 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 OATP04181 439 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 MYL3P08590 195 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 KITP10721 976 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 ITIH2P19823 946 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 TAF11Q15544 211 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 ATP13A4Q4VNC1 1196 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 ANKRD20A8PQ5CZ79 823 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 TWF2Q6IBS0 349 aaKnown RBP20.95■□□□□ 0.94
CSPG5-201ENST00000264723 ERP27Q96DN0 273 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms