RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 MMP14P50281 582 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 PRAMEP78395 509 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 YWHAHQ04917 246 aaPredicted RBP14.74□□□□□ -0.05
CDH3-201ENST00000264012 POU5F1BQ06416 359 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 APOBEC3HQ6NTF7 200 aaKnown RBP14.74□□□□□ -0.05
CDH3-201ENST00000264012 TRMT10CQ7L0Y3 403 aaKnown RBP14.74□□□□□ -0.05
CDH3-201ENST00000264012 ZNF720Q7Z2F6 126 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 SH2D3CQ8N5H7 860 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 TTC8Q8TAM2 541 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 PGBD4Q96DM1 585 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 FAM96AQ9H5X1 160 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 RAB6BQ9NRW1 208 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 KCNH4Q9UQ05 1017 aa14.74□□□□□ -0.05
CDH3-201ENST00000264012 SPECC1L-ADORA2AF8WAN1 911 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 KITP10721 976 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 BRD2P25440 801 aaKnown RBP14.73□□□□□ -0.05
CDH3-201ENST00000264012 CARSP49589 748 aaKnown RBP14.73□□□□□ -0.05
CDH3-201ENST00000264012 MKRN4PQ13434 485 aaPredicted RBP14.73□□□□□ -0.05
CDH3-201ENST00000264012 CUL2Q13617 745 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 NUDCD3Q8IVD9 361 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 PDZD8Q8NEN9 1154 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 TPCN2Q8NHX9 752 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 SENP1Q9P0U3 644 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 OGTO15294 1046 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 NVLO15381 856 aaKnown RBP14.73□□□□□ -0.05
CDH3-201ENST00000264012 GYG2O15488 501 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 ATP9BO43861 1147 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 TAL1P17542 331 aaPredicted RBP14.73□□□□□ -0.05
CDH3-201ENST00000264012 KCNJ1P48048 391 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 DRP2Q13474 957 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 SYCP2LQ5T4T6 812 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 RASSF3Q86WH2 238 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 ELMOD1Q8N336 334 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 MMGT1Q8N4V1 131 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 RAPGEF5Q92565 580 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 SPDL1Q96EA4 605 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 LRRC37BQ96QE4 947 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 FAM118BQ9BPY3 351 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 LMCD1Q9NZU5 365 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 ZFP69BQ9UJL9 534 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 ZBBXA8MT70 800 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 AP5Z1O43299 807 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 AKAP3O75969 853 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 GNASQ5JWF2 1037 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 FEZF2Q8TBJ5 459 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 CELF4Q9BZC1 486 aaKnown RBP14.73□□□□□ -0.05
CDH3-201ENST00000264012 MTFR1LQ9H019 292 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 PXMP2Q9NR77 195 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 ZFATQ9P243 1243 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 BAZ2BQ9UIF8 2168 aaKnown RBP14.73□□□□□ -0.05
CDH3-201ENST00000264012 AGTP01019 485 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 ITGA4P13612 1032 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 NAMPTP43490 491 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 PSMC6P62333 389 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 DACT2Q5SW24 774 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 NOTUMQ6P988 496 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 UBA3Q8TBC4 463 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 NUDT12Q9BQG2 462 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 IDI2Q9BXS1 227 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 CARD9Q9H257 536 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 SLC38A7Q9NVC3 462 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 GTSE1Q9NYZ3 720 aa14.73□□□□□ -0.05
CDH3-201ENST00000264012 CDH16O75309 829 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 CELF2O95319 508 aaKnown RBP14.72□□□□□ -0.05
CDH3-201ENST00000264012 ITGB3P05106 788 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 PGK2P07205 417 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 RPAINQ86UA6 219 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 DDX42Q86XP3 938 aaKnown RBP eCLIP14.72□□□□□ -0.05
CDH3-201ENST00000264012 CYP2W1Q8TAV3 490 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 HAUS8Q9BT25 410 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 NEU2Q9Y3R4 380 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 DUSP10Q9Y6W6 482 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 PPP1R37O75864 691 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 HAUS5O94927 633 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 NPTXRO95502 500 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 HSPA9P38646 679 aaKnown RBP14.72□□□□□ -0.05
CDH3-201ENST00000264012 MDM2Q00987 491 aaPredicted RBP14.72□□□□□ -0.05
CDH3-201ENST00000264012 NSUN2Q08J23 767 aaKnown RBP eCLIP14.72□□□□□ -0.05
CDH3-201ENST00000264012 VEPH1Q14D04 833 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 C4orf19Q8IY42 314 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 ARHGEF26Q96DR7 871 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 ERP44Q9BS26 406 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 TRABDQ9H4I3 376 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 ADARB2Q9NS39 739 aaKnown RBP14.72□□□□□ -0.05
CDH3-201ENST00000264012 CHUKO15111 745 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 ZNF189O75820 626 aaPredicted RBP14.72□□□□□ -0.05
CDH3-201ENST00000264012 ARFIP2P53365 341 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 ANKRD20A4Q4UJ75 823 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 ANKRD20A8PQ5CZ79 823 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 FSCBQ5H9T9 825 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 ANKRD20A2Q5SQ80 823 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 ANKRD20A1Q5TYW2 823 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 ACAD10Q6JQN1 1059 aa14.72□□□□□ -0.05
CDH3-201ENST00000264012 C1orf131Q8NDD1 294 aaKnown RBP14.72□□□□□ -0.05
CDH3-201ENST00000264012 AGO4Q9HCK5 861 aaKnown RBP14.72□□□□□ -0.05
CDH3-201ENST00000264012 TPX2Q9ULW0 747 aaKnown RBP14.72□□□□□ -0.05
CDH3-201ENST00000264012 GNGT2O14610 69 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 CYTH3O43739 400 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 CST8O60676 142 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 ATP5HO75947 161 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms