RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 ZFAND2BQ8WV99 257 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 INPP5DQ92835 1189 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 NTPCRQ9BSD7 190 aaKnown RBP11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 CCDC113Q9H0I3 377 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 LRMDAQ9H2I8 198 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 HSPBP1Q9NZL4 362 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 FBXO40Q9UH90 709 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 AJAP1Q9UKB5 411 aaPredicted RBP11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 PNMA3Q9UL41 463 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 SCAF8Q9UPN6 1271 aaKnown RBP11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 COL11A1P12107 1806 aaPredicted RBP11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 DICER1Q9UPY3 1922 aaKnown RBP11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 LRRD1A4D1F6 860 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 ENO4A6NNW6 628 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 ATP9AO75110 1047 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 KCNA2P16389 499 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 GTF2H1P32780 548 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 PEX3P56589 373 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 KIF22Q14807 665 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 MTFR1Q15390 333 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 CBWD6Q4V339 395 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 CBWD3Q5JTY5 395 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 CBWD5Q5RIA9 395 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 FAM102BQ5T8I3 360 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 CWF19L1Q69YN2 538 aaKnown RBP11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 MAP4K3Q8IVH8 894 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 KSR1Q8IVT5 923 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 ENDOVQ8N8Q3 282 aaKnown RBP11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 KCNN1Q92952 543 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 C18orf8Q96DM3 657 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 FAM81BQ96LP2 452 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 RPS6KC1Q96S38 1066 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 YIPF3Q9GZM5 350 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 JPH1Q9HDC5 661 aaPredicted RBP11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 CYP39A1Q9NYL5 469 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 GGA3Q9NZ52 723 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 AFG3L2Q9Y4W6 797 aa11.5□□□□□ -0.57
CHRNA1-201ENST00000261007 PASKQ96RG2 1323 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 FGFR4P22455 802 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 CNGA1P29973 690 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 SLCO1A2P46721 670 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 CTCFP49711 727 aaPredicted RBP11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 ROR2Q01974 943 aaKnown RBP11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 SF3A3Q12874 501 aaKnown RBP eCLIP11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 DGKZQ13574 1117 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 TMEM132BQ14DG7 1078 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 UGCGQ16739 394 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 SPDYAQ5MJ70 313 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 WASHC2DQ5SRD0 308 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 ANO7Q6IWH7 933 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 CCDC137Q6PK04 289 aaKnown RBP11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 ARHGEF18Q6ZSZ5 1173 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 MAEAQ7L5Y9 396 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 C12orf50Q8NA57 414 aaPredicted RBP11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 TMC2Q8TDI7 906 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 PARD3BQ8TEW8 1205 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 FBXO41Q8TF61 875 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 STK32AQ8WU08 396 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 ALG3Q92685 438 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 ZBTB10Q96DT7 871 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 CEP170P1Q96L14 293 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 TSC22D3Q99576 134 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 KMT5AQ9NQR1 393 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 WHRNQ9P202 907 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 SLC9A2Q9UBY0 812 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 GGT7Q9UJ14 662 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 MTUS1Q9ULD2 1270 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 TBX20Q9UMR3 447 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 RIPK3Q9Y572 518 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 ACTL7BQ9Y614 415 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 ALG6Q9Y672 507 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 EMSYQ7Z589 1322 aa11.49□□□□□ -0.57
CHRNA1-201ENST00000261007 SPATA31C2B4DYI2 1134 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 SLC16A4O15374 487 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 LMNAP02545 664 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 TRIM49P0CI25 452 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 TRIM49CP0CI26 452 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 ACADSP16219 412 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 TNFAIP3P21580 790 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 ICAM3P32942 547 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 COPB2P35606 906 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 COILP38432 576 aaPredicted RBP11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 GCLCP48506 637 aaPredicted RBP11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 PAPOLAP51003 745 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 RAB27AP51159 221 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 ZNF211Q13398 564 aaPredicted RBP11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 EPC2Q52LR7 807 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 TTC27Q6P3X3 843 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 PPP1R21Q6ZMI0 780 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 ADAT2Q7Z6V5 191 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 GLYCTKQ8IVS8 523 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 TMEM161BQ8NDZ6 487 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 SLCO2A1Q92959 643 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 ETNK1Q9HBU6 452 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 GABBR1Q9UBS5 961 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 IGSF9BQ9UPX0 1349 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 DPPA5A6NC42 116 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 SPDYE16A6NNV3 312 aaPredicted RBP11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 PEX11AO75192 247 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms