RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 EXOC4Q96A65 974 aa18.93■□□□□ 0.62
SSB-201ENST00000260956 FAM167AQ96KS9 214 aa18.93■□□□□ 0.62
SSB-201ENST00000260956 CGRRF1Q99675 332 aa18.93■□□□□ 0.62
SSB-201ENST00000260956 SENP6Q9GZR1 1112 aaPredicted RBP18.93■□□□□ 0.62
SSB-201ENST00000260956 ADAM21Q9UKJ8 722 aa18.93■□□□□ 0.62
SSB-201ENST00000260956 Q9Y3F1 56 aa18.93■□□□□ 0.62
SSB-201ENST00000260956 ESYT3A0FGR9 886 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 LRRIQ4A6NIV6 560 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 FAM153BP0C7A2 387 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 ACLYP53396 1101 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 GUCY2DQ02846 1103 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 STRN3Q13033 797 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 PAK2Q13177 524 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 CLEC16AQ2KHT3 1053 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 FAM153CQ494X1 144 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 SLFN12LQ6IEE8 588 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 ZPBP2Q6X784 338 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 UBR7Q8N806 425 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 OR6J1Q8NGC5 347 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 AFG1LQ8WV93 481 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 FAM81BQ96LP2 452 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 RPS6KC1Q96S38 1066 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 SLITRK6Q9H5Y7 841 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 APOBEC3GQ9HC16 384 aaKnown RBP18.92■□□□□ 0.62
SSB-201ENST00000260956 EPB41L5Q9HCM4 733 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 NRBP2Q9NSY0 501 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 SEPT11Q9NVA2 429 aaKnown RBP18.92■□□□□ 0.62
SSB-201ENST00000260956 FAM153AQ9UHL3 310 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 CNTN6Q9UQ52 1028 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 NR2E1Q9Y466 385 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 ALG6Q9Y672 507 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 CEP290O15078 2479 aa18.92■□□□□ 0.62
SSB-201ENST00000260956 K7ERI5 159 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 SART1O43290 800 aaKnown RBP18.91■□□□□ 0.62
SSB-201ENST00000260956 ASGR1P07306 291 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 UNGP13051 313 aaPredicted RBP18.91■□□□□ 0.62
SSB-201ENST00000260956 GGCXP38435 758 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 MARCKSL1P49006 195 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 ACOT2P49753 483 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 PEX5P50542 639 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 PDE6CP51160 858 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 HSDL1Q3SXM5 330 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 LMBRD2Q68DH5 695 aaPredicted RBP18.91■□□□□ 0.62
SSB-201ENST00000260956 NECAB2Q7Z6G3 386 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 AP1M1Q9BXS5 423 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 AP5M1Q9H0R1 490 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 C11orf49Q9H6J7 331 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 NFU1Q9UMS0 254 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 PHF24Q9UPV7 400 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 A6NJR5 290 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 MIF4GDA9UHW6 222 aaKnown RBP18.91■□□□□ 0.62
SSB-201ENST00000260956 ATMINO43313 823 aaPredicted RBP18.91■□□□□ 0.62
SSB-201ENST00000260956 USP8P40818 1118 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 KCNV1Q6PIU1 500 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 CXCL17Q6UXB2 119 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 PLPPR4Q7Z2D5 763 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 TRIM50Q86XT4 487 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 KLHL7Q8IXQ5 586 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 ATP8B4Q8TF62 1192 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 BBXQ8WY36 941 aaPredicted RBP18.91■□□□□ 0.62
SSB-201ENST00000260956 KRT35Q92764 455 aa18.91■□□□□ 0.62
SSB-201ENST00000260956 RNPC3Q96LT9 517 aaKnown RBP18.91■□□□□ 0.62
SSB-201ENST00000260956 PDE4DIPQ5VU43 2346 aa18.9■□□□□ 0.62
SSB-201ENST00000260956 A0A1W2PQ45 241 aaPredicted RBP18.9■□□□□ 0.62
SSB-201ENST00000260956 A0A1W2PQY0 241 aa18.9■□□□□ 0.62
SSB-201ENST00000260956 RNF40O75150 1001 aa18.9■□□□□ 0.62
SSB-201ENST00000260956 GH1P01241 217 aa18.9■□□□□ 0.62
SSB-201ENST00000260956 ATN1P54259 1190 aaPredicted RBP18.9■□□□□ 0.62
SSB-201ENST00000260956 PLCB4Q15147 1175 aa18.9■□□□□ 0.62
SSB-201ENST00000260956 ACAD10Q6JQN1 1059 aa18.9■□□□□ 0.62
SSB-201ENST00000260956 CPNE8Q86YQ8 564 aa18.9■□□□□ 0.62
SSB-201ENST00000260956 BRSK2Q8IWQ3 736 aa18.9■□□□□ 0.62
SSB-201ENST00000260956 PPP1R13LQ8WUF5 828 aa18.9■□□□□ 0.62
SSB-201ENST00000260956 RIN2Q8WYP3 895 aaPredicted RBP18.9■□□□□ 0.62
SSB-201ENST00000260956 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.9■□□□□ 0.62
SSB-201ENST00000260956 PIK3R5Q8WYR1 880 aa18.9■□□□□ 0.62
SSB-201ENST00000260956 ZSWIM1Q9BR11 485 aa18.9■□□□□ 0.62
SSB-201ENST00000260956 DDX47Q9H0S4 455 aaKnown RBP18.9■□□□□ 0.62
SSB-201ENST00000260956 C1orf112Q9NSG2 853 aa18.9■□□□□ 0.62
SSB-201ENST00000260956 RBAKQ9NYW8 714 aaPredicted RBP18.9■□□□□ 0.62
SSB-201ENST00000260956 VPS18Q9P253 973 aa18.9■□□□□ 0.62
SSB-201ENST00000260956 CTTNBP2NLQ9P2B4 639 aa18.9■□□□□ 0.62
SSB-201ENST00000260956 TRPC6Q9Y210 931 aa18.9■□□□□ 0.62
SSB-201ENST00000260956 GRIN2DO15399 1336 aa18.9■□□□□ 0.62
SSB-201ENST00000260956 LAMA3Q16787 3333 aa18.89■□□□□ 0.62
SSB-201ENST00000260956 FAM170AA1A519 330 aa18.89■□□□□ 0.61
SSB-201ENST00000260956 KBTBD13C9JR72 458 aa18.89■□□□□ 0.61
SSB-201ENST00000260956 KRIT1O00522 736 aa18.89■□□□□ 0.61
SSB-201ENST00000260956 GAS2O43903 313 aaKnown RBP18.89■□□□□ 0.61
SSB-201ENST00000260956 CALCAP01258 141 aa18.89■□□□□ 0.61
SSB-201ENST00000260956 PTENP60484 403 aa18.89■□□□□ 0.61
SSB-201ENST00000260956 LRRC26Q2I0M4 334 aa18.89■□□□□ 0.61
SSB-201ENST00000260956 IER5Q5VY09 327 aa18.89■□□□□ 0.61
SSB-201ENST00000260956 SCARA3Q6AZY7 606 aa18.89■□□□□ 0.61
SSB-201ENST00000260956 DHX37Q8IY37 1157 aaKnown RBP18.89■□□□□ 0.61
SSB-201ENST00000260956 OR5B17Q8NGF7 314 aa18.89■□□□□ 0.61
SSB-201ENST00000260956 PRPF31Q8WWY3 499 aaKnown RBP18.89■□□□□ 0.61
SSB-201ENST00000260956 EMID1Q96A84 441 aaPredicted RBP18.89■□□□□ 0.61
SSB-201ENST00000260956 MSTO1Q9BUK6 570 aa18.89■□□□□ 0.61
SSB-201ENST00000260956 LDHAP00338 332 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms