RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 PTPN14Q15678 1187 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 KIAA0319Q5VV43 1072 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 KIAA1841Q6NSI8 718 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 TMEM174Q8WUU8 243 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 CLSTN2Q9H4D0 955 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 PRDM6Q9NQX0 595 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 TRAF3IP3Q9Y228 551 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 TRAPPC3O43617 180 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 EXOC3O60645 756 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 LILRB3O75022 631 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 GLUD2P49448 558 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 DSG1Q02413 1049 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 COL19A1Q14993 1142 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 SNRNP35Q16560 246 aaKnown RBP18.14■□□□□ 0.49
SDCBP-201ENST00000260130 CAMK4Q16566 473 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 DUSP6Q16828 381 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 FAM171A1Q5VUB5 890 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 EFCAB13Q8IY85 973 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 TMEM130Q8N3G9 435 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 KIAA1524Q8TCG1 905 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 HLA-CQ95604 372 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 PABPC5Q96DU9 382 aaKnown RBP18.14■□□□□ 0.49
SDCBP-201ENST00000260130 CDCA3Q99618 268 aaPredicted RBP18.14■□□□□ 0.49
SDCBP-201ENST00000260130 PDE11AQ9HCR9 933 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 COG5Q9UP83 839 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 NUB1Q9Y5A7 615 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 C2CD2LO14523 706 aa18.13■□□□□ 0.49
SDCBP-201ENST00000260130 CALUO43852 315 aaPredicted RBP18.13■□□□□ 0.49
SDCBP-201ENST00000260130 GUCY2FP51841 1108 aa18.13■□□□□ 0.49
SDCBP-201ENST00000260130 SLC9A9Q8IVB4 645 aa18.13■□□□□ 0.49
SDCBP-201ENST00000260130 B3GALT6Q96L58 329 aa18.13■□□□□ 0.49
SDCBP-201ENST00000260130 DMAC2Q9NW81 257 aa18.13■□□□□ 0.49
SDCBP-201ENST00000260130 MAN1B1Q9UKM7 699 aa18.13■□□□□ 0.49
SDCBP-201ENST00000260130 PRCPP42785 496 aa18.13■□□□□ 0.49
SDCBP-201ENST00000260130 BRCC3P46736 316 aa18.13■□□□□ 0.49
SDCBP-201ENST00000260130 MYBPC2Q14324 1141 aa18.13■□□□□ 0.49
SDCBP-201ENST00000260130 SURF1Q15526 300 aa18.13■□□□□ 0.49
SDCBP-201ENST00000260130 CTC1Q2NKJ3 1217 aa18.13■□□□□ 0.49
SDCBP-201ENST00000260130 COBLL1Q53SF7 1204 aa18.13■□□□□ 0.49
SDCBP-201ENST00000260130 ISM2Q6H9L7 571 aa18.13■□□□□ 0.49
SDCBP-201ENST00000260130 GPR65Q8IYL9 337 aa18.13■□□□□ 0.49
SDCBP-201ENST00000260130 EFHBQ8N7U6 833 aa18.13■□□□□ 0.49
SDCBP-201ENST00000260130 CACTINQ8WUQ7 758 aaKnown RBP18.13■□□□□ 0.49
SDCBP-201ENST00000260130 TTPALQ9BTX7 342 aa18.13■□□□□ 0.49
SDCBP-201ENST00000260130 DPP3Q9NY33 737 aa18.13■□□□□ 0.49
SDCBP-201ENST00000260130 CLDND1Q9NY35 253 aa18.13■□□□□ 0.49
SDCBP-201ENST00000260130 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.12■□□□□ 0.49
SDCBP-201ENST00000260130 CAVIN2O95810 425 aa18.12■□□□□ 0.49
SDCBP-201ENST00000260130 NR3C1P04150 777 aa18.12■□□□□ 0.49
SDCBP-201ENST00000260130 TFAMQ00059 246 aaKnown RBP18.12■□□□□ 0.49
SDCBP-201ENST00000260130 ADAM15Q13444 863 aa18.12■□□□□ 0.49
SDCBP-201ENST00000260130 RTP2Q5QGT7 225 aa18.12■□□□□ 0.49
SDCBP-201ENST00000260130 EP400NLQ6ZTU2 488 aa18.12■□□□□ 0.49
SDCBP-201ENST00000260130 CEP57Q86XR8 500 aa18.12■□□□□ 0.49
SDCBP-201ENST00000260130 EMILIN2Q9BXX0 1053 aa18.12■□□□□ 0.49
SDCBP-201ENST00000260130 UNC80Q8N2C7 3258 aa18.12■□□□□ 0.49
SDCBP-201ENST00000260130 I3L4J1 428 aa18.11■□□□□ 0.49
SDCBP-201ENST00000260130 C9orf57Q5W0N0 161 aa18.11■□□□□ 0.49
SDCBP-201ENST00000260130 SPC24Q8NBT2 197 aa18.11■□□□□ 0.49
SDCBP-201ENST00000260130 RIN2Q8WYP3 895 aaPredicted RBP18.11■□□□□ 0.49
SDCBP-201ENST00000260130 KCNF1Q9H3M0 494 aa18.11■□□□□ 0.49
SDCBP-201ENST00000260130 UBE2ZQ9H832 354 aaPredicted RBP18.11■□□□□ 0.49
SDCBP-201ENST00000260130 THEGQ9P2T0 379 aa18.11■□□□□ 0.49
SDCBP-201ENST00000260130 ATG2AQ2TAZ0 1938 aa18.11■□□□□ 0.49
SDCBP-201ENST00000260130 ANO9A1A5B4 782 aa18.11■□□□□ 0.49
SDCBP-201ENST00000260130 PIRO00625 290 aa18.11■□□□□ 0.49
SDCBP-201ENST00000260130 LINC01565O15544 149 aa18.11■□□□□ 0.49
SDCBP-201ENST00000260130 CNPP09543 421 aaKnown RBP18.11■□□□□ 0.49
SDCBP-201ENST00000260130 FGFR3P22607 806 aa18.11■□□□□ 0.49
SDCBP-201ENST00000260130 CYP24A1Q07973 514 aa18.11■□□□□ 0.49
SDCBP-201ENST00000260130 NFIL3Q16649 462 aa18.11■□□□□ 0.49
SDCBP-201ENST00000260130 ANO6Q4KMQ2 910 aa18.11■□□□□ 0.49
SDCBP-201ENST00000260130 MFSD14AQ96MC6 490 aa18.11■□□□□ 0.49
SDCBP-201ENST00000260130 KLHL5Q96PQ7 755 aa18.11■□□□□ 0.49
SDCBP-201ENST00000260130 RXFP1Q9HBX9 757 aa18.11■□□□□ 0.49
SDCBP-201ENST00000260130 CBX8Q9HC52 389 aa18.11■□□□□ 0.49
SDCBP-201ENST00000260130 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.11■□□□□ 0.49
SDCBP-201ENST00000260130 KIAA1468Q9P260 1216 aa18.11■□□□□ 0.49
SDCBP-201ENST00000260130 CLASP2O75122 1294 aaKnown RBP18.1■□□□□ 0.49
SDCBP-201ENST00000260130 MORC3Q14149 939 aa18.1■□□□□ 0.49
SDCBP-201ENST00000260130 PSMD6Q15008 389 aa18.1■□□□□ 0.49
SDCBP-201ENST00000260130 ZCWPW2Q504Y3 356 aa18.1■□□□□ 0.49
SDCBP-201ENST00000260130 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.1■□□□□ 0.49
SDCBP-201ENST00000260130 ADSSL1Q8N142 457 aa18.1■□□□□ 0.49
SDCBP-201ENST00000260130 C17orf53Q8N3J3 647 aaPredicted RBP18.1■□□□□ 0.49
SDCBP-201ENST00000260130 SUSD3Q96L08 255 aa18.1■□□□□ 0.49
SDCBP-201ENST00000260130 PDCD11Q14690 1871 aaKnown RBP18.1■□□□□ 0.49
SDCBP-201ENST00000260130 PPEF2O14830 753 aa18.1■□□□□ 0.49
SDCBP-201ENST00000260130 RPL13P26373 211 aaKnown RBP18.1■□□□□ 0.49
SDCBP-201ENST00000260130 LTBRP36941 435 aa18.1■□□□□ 0.49
SDCBP-201ENST00000260130 KCNC3Q14003 757 aa18.1■□□□□ 0.49
SDCBP-201ENST00000260130 CENPPQ6IPU0 288 aa18.1■□□□□ 0.49
SDCBP-201ENST00000260130 PDXDC1Q6P996 788 aa18.1■□□□□ 0.49
SDCBP-201ENST00000260130 LUZP1Q86V48 1076 aa18.1■□□□□ 0.49
SDCBP-201ENST00000260130 LNX1Q8TBB1 728 aaPredicted RBP18.1■□□□□ 0.49
SDCBP-201ENST00000260130 PIK3R5Q8WYR1 880 aa18.1■□□□□ 0.49
SDCBP-201ENST00000260130 CCDC127Q96BQ5 260 aa18.1■□□□□ 0.49
SDCBP-201ENST00000260130 FNBP1Q96RU3 617 aa18.1■□□□□ 0.49
SDCBP-201ENST00000260130 INTS13Q9NVM9 706 aa18.1■□□□□ 0.49
SDCBP-201ENST00000260130 BIN1O00499 593 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms