RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 SMIM10L2AP0DMW4 78 aa29.64■■■□□ 2.34
CCM2-201ENST00000258781 SMIM10L2BP0DMW5 78 aa29.64■■■□□ 2.34
CCM2-201ENST00000258781 MCM3P25205 808 aa29.64■■■□□ 2.34
CCM2-201ENST00000258781 PSEN2P49810 448 aa29.64■■■□□ 2.34
CCM2-201ENST00000258781 ARHGEF6Q15052 776 aa29.64■■■□□ 2.34
CCM2-201ENST00000258781 KYAT1Q16773 422 aa29.64■■■□□ 2.34
CCM2-201ENST00000258781 CCDC70Q6NSX1 233 aa29.64■■■□□ 2.34
CCM2-201ENST00000258781 KIAA0319LQ8IZA0 1049 aa29.64■■■□□ 2.34
CCM2-201ENST00000258781 RPF1Q9H9Y2 349 aaKnown RBP29.64■■■□□ 2.34
CCM2-201ENST00000258781 ARFGAP3Q9NP61 516 aa29.64■■■□□ 2.34
CCM2-201ENST00000258781 XPNPEP3Q9NQH7 507 aa29.64■■■□□ 2.34
CCM2-201ENST00000258781 AMFRQ9UKV5 643 aa29.64■■■□□ 2.34
CCM2-201ENST00000258781 INHAP05111 366 aa29.63■■■□□ 2.33
CCM2-201ENST00000258781 CLEC16AQ2KHT3 1053 aa29.63■■■□□ 2.33
CCM2-201ENST00000258781 NLRP7Q8WX94 980 aa29.63■■■□□ 2.33
CCM2-201ENST00000258781 PDZD7Q9H5P4 517 aa29.63■■■□□ 2.33
CCM2-201ENST00000258781 ERLIN1O75477 346 aa29.63■■■□□ 2.33
CCM2-201ENST00000258781 NKX3-2P78367 333 aa29.63■■■□□ 2.33
CCM2-201ENST00000258781 HIC1Q14526 733 aa29.63■■■□□ 2.33
CCM2-201ENST00000258781 SGSM1Q2NKQ1 1148 aa29.63■■■□□ 2.33
CCM2-201ENST00000258781 ACAD10Q6JQN1 1059 aa29.63■■■□□ 2.33
CCM2-201ENST00000258781 SLAIN1Q8ND83 568 aa29.63■■■□□ 2.33
CCM2-201ENST00000258781 HES6Q96HZ4 224 aa29.63■■■□□ 2.33
CCM2-201ENST00000258781 COG5Q9UP83 839 aa29.63■■■□□ 2.33
CCM2-201ENST00000258781 FRMPD3Q5JV73 1810 aa29.63■■■□□ 2.33
CCM2-201ENST00000258781 KCNK3O14649 394 aa29.62■■■□□ 2.33
CCM2-201ENST00000258781 ATP8B1O43520 1251 aa29.62■■■□□ 2.33
CCM2-201ENST00000258781 TNNC2P02585 160 aa29.62■■■□□ 2.33
CCM2-201ENST00000258781 TMEM191BP0C7N4 346 aa29.62■■■□□ 2.33
CCM2-201ENST00000258781 DNA2P51530 1060 aa29.62■■■□□ 2.33
CCM2-201ENST00000258781 C11orf63Q6NUN7 778 aa29.62■■■□□ 2.33
CCM2-201ENST00000258781 CEP120Q8N960 986 aa29.62■■■□□ 2.33
CCM2-201ENST00000258781 UBE2Q2Q8WVN8 375 aa29.62■■■□□ 2.33
CCM2-201ENST00000258781 ANKRD36BP1Q96IX9 119 aa29.62■■■□□ 2.33
CCM2-201ENST00000258781 MS4A14Q96JA4 679 aa29.62■■■□□ 2.33
CCM2-201ENST00000258781 SELENOOQ9BVL4 669 aa29.62■■■□□ 2.33
CCM2-201ENST00000258781 EHD2Q9NZN4 543 aa29.62■■■□□ 2.33
CCM2-201ENST00000258781 CTTNBP2NLQ9P2B4 639 aa29.62■■■□□ 2.33
CCM2-201ENST00000258781 GTF3C4Q9UKN8 822 aa29.62■■■□□ 2.33
CCM2-201ENST00000258781 PCDHB4Q9Y5E5 795 aa29.62■■■□□ 2.33
CCM2-201ENST00000258781 UMODL1Q5DID0 1318 aa29.62■■■□□ 2.33
CCM2-201ENST00000258781 NRCAMQ92823 1304 aa29.62■■■□□ 2.33
CCM2-201ENST00000258781 CYP1A2P05177 515 aa29.61■■■□□ 2.33
CCM2-201ENST00000258781 GRK4P32298 578 aa29.61■■■□□ 2.33
CCM2-201ENST00000258781 PRMT2P55345 433 aa29.61■■■□□ 2.33
CCM2-201ENST00000258781 CDC42EP1Q00587 391 aa29.61■■■□□ 2.33
CCM2-201ENST00000258781 CDR2LQ86X02 465 aaPredicted RBP29.61■■■□□ 2.33
CCM2-201ENST00000258781 EFCAB13Q8IY85 973 aa29.61■■■□□ 2.33
CCM2-201ENST00000258781 UBR7Q8N806 425 aa29.61■■■□□ 2.33
CCM2-201ENST00000258781 RUBCNQ92622 972 aa29.61■■■□□ 2.33
CCM2-201ENST00000258781 PPP1R16BQ96T49 567 aa29.61■■■□□ 2.33
CCM2-201ENST00000258781 DDX20Q9UHI6 824 aaKnown RBP29.61■■■□□ 2.33
CCM2-201ENST00000258781 CST3P01034 146 aaPredicted RBP29.61■■■□□ 2.33
CCM2-201ENST00000258781 ARF4P18085 180 aaPredicted RBP29.61■■■□□ 2.33
CCM2-201ENST00000258781 VSNL1P62760 191 aa29.61■■■□□ 2.33
CCM2-201ENST00000258781 TFAMQ00059 246 aaKnown RBP29.61■■■□□ 2.33
CCM2-201ENST00000258781 DNAJC5GQ8N7S2 189 aa29.61■■■□□ 2.33
CCM2-201ENST00000258781 SCLT1Q96NL6 688 aa29.61■■■□□ 2.33
CCM2-201ENST00000258781 SPC25Q9HBM1 224 aa29.61■■■□□ 2.33
CCM2-201ENST00000258781 SMARCAL1Q9NZC9 954 aa29.61■■■□□ 2.33
CCM2-201ENST00000258781 CXCL8P10145 99 aa29.6■■■□□ 2.33
CCM2-201ENST00000258781 MYL6P60660 151 aa29.6■■■□□ 2.33
CCM2-201ENST00000258781 OSTNP61366 133 aa29.6■■■□□ 2.33
CCM2-201ENST00000258781 TRPC3Q13507 836 aa29.6■■■□□ 2.33
CCM2-201ENST00000258781 CXCL17Q6UXB2 119 aa29.6■■■□□ 2.33
CCM2-201ENST00000258781 NIF3L1Q9GZT8 377 aa29.6■■■□□ 2.33
CCM2-201ENST00000258781 TSPAN1O60635 241 aa29.59■■■□□ 2.33
CCM2-201ENST00000258781 STAG3L1P0CL83 205 aa29.59■■■□□ 2.33
CCM2-201ENST00000258781 TRIM72Q6ZMU5 477 aa29.59■■■□□ 2.33
CCM2-201ENST00000258781 RBBP8NLQ8NC74 664 aaPredicted RBP29.59■■■□□ 2.33
CCM2-201ENST00000258781 ACTRT1Q8TDG2 376 aa29.59■■■□□ 2.33
CCM2-201ENST00000258781 KATNAL1Q9BW62 490 aa29.59■■■□□ 2.33
CCM2-201ENST00000258781 CSDE1O75534 798 aaKnown RBP29.59■■■□□ 2.33
CCM2-201ENST00000258781 ERLIN2O94905 339 aa29.59■■■□□ 2.33
CCM2-201ENST00000258781 UNGP13051 313 aaPredicted RBP29.59■■■□□ 2.33
CCM2-201ENST00000258781 TMEM270Q6UE05 265 aa29.59■■■□□ 2.33
CCM2-201ENST00000258781 KLHDC9Q8NEP7 349 aa29.59■■■□□ 2.33
CCM2-201ENST00000258781 ZNF653Q96CK0 615 aa29.59■■■□□ 2.33
CCM2-201ENST00000258781 UVRAGQ9P2Y5 699 aa29.59■■■□□ 2.33
CCM2-201ENST00000258781 MBLAC1A4D2B0 266 aaPredicted RBP29.58■■■□□ 2.33
CCM2-201ENST00000258781 SEC31AO94979 1220 aaKnown RBP29.58■■■□□ 2.33
CCM2-201ENST00000258781 CLSTN1O94985 981 aa29.58■■■□□ 2.33
CCM2-201ENST00000258781 ZNF132P52740 706 aa29.58■■■□□ 2.33
CCM2-201ENST00000258781 CPB2Q96IY4 423 aa29.58■■■□□ 2.33
CCM2-201ENST00000258781 RNF216Q9NWF9 866 aaPredicted RBP29.58■■■□□ 2.33
CCM2-201ENST00000258781 MYCNP04198 464 aaPredicted RBP29.57■■■□□ 2.32
CCM2-201ENST00000258781 ADAM17P78536 824 aa29.57■■■□□ 2.32
CCM2-201ENST00000258781 CCSAPQ6IQ19 270 aaPredicted RBP29.57■■■□□ 2.32
CCM2-201ENST00000258781 TMEM192Q8IY95 271 aa29.57■■■□□ 2.32
CCM2-201ENST00000258781 USP38Q8NB14 1042 aa29.57■■■□□ 2.32
CCM2-201ENST00000258781 SH3TC2Q8TF17 1288 aa29.57■■■□□ 2.32
CCM2-201ENST00000258781 TRIM11Q96F44 468 aa29.57■■■□□ 2.32
CCM2-201ENST00000258781 MTG1Q9BT17 334 aaPredicted RBP29.57■■■□□ 2.32
CCM2-201ENST00000258781 ASB7Q9H672 318 aa29.57■■■□□ 2.32
CCM2-201ENST00000258781 RBM12Q9NTZ6 932 aaKnown RBP29.57■■■□□ 2.32
CCM2-201ENST00000258781 OGFRQ9NZT2 677 aa29.57■■■□□ 2.32
CCM2-201ENST00000258781 SMIM35A0A1B0GVV1 85 aa29.57■■■□□ 2.32
CCM2-201ENST00000258781 CYP1A1P04798 512 aaPredicted RBP29.57■■■□□ 2.32
CCM2-201ENST00000258781 GNA15P30679 374 aa29.57■■■□□ 2.32
CCM2-201ENST00000258781 GLE1Q53GS7 698 aaKnown RBP29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms