RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 TRIP13Q15645 432 aaPredicted RBP16.65■□□□□ 0.26
SIN3B-201ENST00000248054 NOTUMQ6P988 496 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 CDKL3Q8IVW4 592 aaPredicted RBP16.65■□□□□ 0.26
SIN3B-201ENST00000248054 PACSIN2Q9UNF0 486 aaPredicted RBP16.65■□□□□ 0.26
SIN3B-201ENST00000248054 SH3BP5O60239 455 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 PSMD10O75832 226 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 PNPLA4P41247 253 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 PSMC6P62333 389 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 PSMD6Q15008 389 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 TMED2Q15363 201 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 ANKRD20A4Q4UJ75 823 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 ANKRD20A8PQ5CZ79 823 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 ANKRD20A2Q5SQ80 823 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 ANKRD20A1Q5TYW2 823 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 CGRRF1Q99675 332 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 HEMGNQ9BXL5 484 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 FOXP3Q9BZS1 431 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 GPRC5DQ9NZD1 345 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 CPSF3Q9UKF6 684 aaKnown RBP16.65■□□□□ 0.26
SIN3B-201ENST00000248054 TTI1O43156 1089 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 LSP1P33241 339 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 RGS2P41220 211 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 HAS1Q92839 578 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 RNF25Q96BH1 459 aaPredicted RBP16.65■□□□□ 0.26
SIN3B-201ENST00000248054 CARD9Q9H257 536 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 EPS15L1Q9UBC2 864 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 CYP2C9P11712 490 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 KLRC1P26715 233 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 BBS9Q3SYG4 887 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 HYIQ5T013 277 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 ATG16L1Q676U5 607 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 SLC30A10Q6XR72 485 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 SPATA20Q8TB22 786 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 AIPL1Q9NZN9 384 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 KCNH4Q9UQ05 1017 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 PKD1L3Q7Z443 1732 aa16.65■□□□□ 0.26
SIN3B-201ENST00000248054 SEC24CP53992 1094 aa16.64■□□□□ 0.26
SIN3B-201ENST00000248054 PMS1P54277 932 aaKnown RBP16.64■□□□□ 0.26
SIN3B-201ENST00000248054 CDR2Q01850 454 aa16.64■□□□□ 0.26
SIN3B-201ENST00000248054 CUL2Q13617 745 aa16.64■□□□□ 0.26
SIN3B-201ENST00000248054 MPZL3Q6UWV2 235 aa16.64■□□□□ 0.26
SIN3B-201ENST00000248054 GBA2Q9HCG7 927 aaPredicted RBP16.64■□□□□ 0.26
SIN3B-201ENST00000248054 COL9A3Q14050 684 aaPredicted RBP16.64■□□□□ 0.25
SIN3B-201ENST00000248054 KLHL38Q2WGJ6 581 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 CYB5D1Q6P9G0 228 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 CATSPERGQ6ZRH7 1159 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 FAF2Q96CS3 445 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 ZNF668Q96K58 619 aaPredicted RBP16.64■□□□□ 0.25
SIN3B-201ENST00000248054 CCDC68Q9H2F9 335 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 LLGL1Q15334 1064 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 DNAAF3Q8N9W5 541 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 APPL2Q8NEU8 664 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 ATP8B4Q8TF62 1192 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 OPTNQ96CV9 577 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 KIAA1257Q9ULG3 409 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 RGPD5Q99666 1765 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 KLRG2A4D1S0 409 aaPredicted RBP16.64■□□□□ 0.25
SIN3B-201ENST00000248054 PSEN1P49768 467 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 ALDH5A1P51649 535 aaPredicted RBP16.64■□□□□ 0.25
SIN3B-201ENST00000248054 PPP6R3Q5H9R7 873 aaPredicted RBP16.64■□□□□ 0.25
SIN3B-201ENST00000248054 ACAD10Q6JQN1 1059 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 WDR93Q6P2C0 686 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 LRRC71Q8N4P6 559 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 TAB3Q8N5C8 712 aaPredicted RBP16.64■□□□□ 0.25
SIN3B-201ENST00000248054 NT5C1AQ9BXI3 368 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 TRIM10Q9UDY6 481 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 UBIAD1Q9Y5Z9 338 aa16.64■□□□□ 0.25
SIN3B-201ENST00000248054 ACADSBP45954 432 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 CASP4P49662 377 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 CYP24A1Q07973 514 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 SV2CQ496J9 727 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 CYP2W1Q8TAV3 490 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 EFHC2Q5JST6 749 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 PAPD7Q5XG87 772 aaKnown RBP16.63■□□□□ 0.25
SIN3B-201ENST00000248054 RIOX2Q8IUF8 465 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 VTA1Q9NP79 307 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 SAYSD1Q9NPB0 183 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 GPRC5CQ9NQ84 441 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 AFG3L2Q9Y4W6 797 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 H3BRJ5 948 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 KLRC4O43908 158 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 KRT14P02533 472 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 PPIL2Q13356 520 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 SPARCL1Q14515 664 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 RASIP1Q5U651 963 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 TPCN2Q8NHX9 752 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 PRPF31Q8WWY3 499 aaKnown RBP16.63■□□□□ 0.25
SIN3B-201ENST00000248054 CBWD1Q9BRT8 395 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 LRRC1Q9BTT6 524 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 ZNF518BQ9C0D4 1074 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 NFASCO94856 1347 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 SMAPO00193 183 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 DDNO94850 711 aaPredicted RBP16.63■□□□□ 0.25
SIN3B-201ENST00000248054 PPM1FP49593 454 aaPredicted RBP16.63■□□□□ 0.25
SIN3B-201ENST00000248054 CBWD2Q8IUF1 395 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 C4orf32Q8N8J7 132 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 USP38Q8NB14 1042 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 SCYL1Q96KG9 808 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 EFHD1Q9BUP0 239 aa16.63■□□□□ 0.25
SIN3B-201ENST00000248054 SCOCQ9UIL1 159 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms