RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 CXCL16Q9H2A7 254 aa19.24■□□□□ 0.67
KLHDC3-201ENST00000244670 SNTG2Q9NY99 539 aa19.24■□□□□ 0.67
KLHDC3-201ENST00000244670 PCDHB4Q9Y5E5 795 aa19.24■□□□□ 0.67
KLHDC3-201ENST00000244670 GRID2IPA4D2P6 1211 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 PDE2AO00408 941 aaPredicted RBP19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 CTSHP09668 335 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 GRM5P41594 1212 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 CLCN6P51797 869 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 GUCY2FP51841 1108 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 FMO1Q01740 532 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 KYAT1Q16773 422 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 ZNF699Q32M78 642 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 CCSAPQ6IQ19 270 aaPredicted RBP19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 TMEM270Q6UE05 265 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 SCARA5Q6ZMJ2 495 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 C1orf127Q8N9H9 656 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 COG1Q8WTW3 980 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 ARGLU1Q9NWB6 273 aaPredicted RBP19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 SIX4Q9UIU6 781 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 TSKSQ9UJT2 592 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 FKTNO75072 461 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 ITGB3P05106 788 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 TBXAS1P24557 533 aaPredicted RBP19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 CBX1P83916 185 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 SGSM1Q2NKQ1 1148 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 OSBPL9Q96SU4 736 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 APOL6Q9BWW8 343 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 CELF4Q9BZC1 486 aaKnown RBP19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 TRIM6Q9C030 488 aaPredicted RBP19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 ASB7Q9H672 318 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 ANKZF1Q9H8Y5 726 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 CDY2AQ9Y6F7 541 aa19.23■□□□□ 0.67
KLHDC3-201ENST00000244670 GRIN2DO15399 1336 aa19.22■□□□□ 0.67
KLHDC3-201ENST00000244670 INHAP05111 366 aa19.22■□□□□ 0.67
KLHDC3-201ENST00000244670 PRLRP16471 622 aa19.22■□□□□ 0.67
KLHDC3-201ENST00000244670 CD58P19256 250 aa19.22■□□□□ 0.67
KLHDC3-201ENST00000244670 NOP2P46087 812 aaKnown RBP19.22■□□□□ 0.67
KLHDC3-201ENST00000244670 MRPS6P82932 125 aaKnown RBP19.22■□□□□ 0.67
KLHDC3-201ENST00000244670 TMEM132DQ14C87 1099 aa19.22■□□□□ 0.67
KLHDC3-201ENST00000244670 PCBP1Q15365 356 aaKnown RBP eCLIP19.22■□□□□ 0.673e-9■■■■□ 25
KLHDC3-201ENST00000244670 CREG2Q8IUH2 290 aa19.22■□□□□ 0.67
KLHDC3-201ENST00000244670 PSMB7Q99436 277 aa19.22■□□□□ 0.67
KLHDC3-201ENST00000244670 XYLT2Q9H1B5 865 aa19.22■□□□□ 0.67
KLHDC3-201ENST00000244670 NXF3Q9H4D5 531 aaKnown RBP19.22■□□□□ 0.67
KLHDC3-201ENST00000244670 OGFRQ9NZT2 677 aa19.22■□□□□ 0.67
KLHDC3-201ENST00000244670 HYOU1Q9Y4L1 999 aa19.22■□□□□ 0.67
KLHDC3-201ENST00000244670 FTCDO95954 541 aa19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 CST5P28325 142 aaPredicted RBP19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 CDR2Q01850 454 aa19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 APBB1IPQ7Z5R6 666 aaPredicted RBP19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 PXYLP1Q8TE99 480 aa19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 DDX1Q92499 740 aaKnown RBP19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 KIF12Q96FN5 646 aa19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 PARD6BQ9BYG5 372 aa19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 NIF3L1Q9GZT8 377 aa19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 RNF19AQ9NV58 838 aa19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 ZNF446Q9NWS9 450 aa19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 NXF1Q9UBU9 619 aaKnown RBP19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 INTUQ9ULD6 942 aa19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 POLIQ9UNA4 740 aa19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 NOC2LQ9Y3T9 749 aaKnown RBP19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 RALGAPA2Q2PPJ7 1873 aa19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 M0QZ92 97 aa19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 CXCR5P32302 372 aa19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 FAM228AQ86W67 206 aa19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 PCSK9Q8NBP7 692 aaKnown RBP19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 RBBP8NLQ8NC74 664 aaPredicted RBP19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 ARHGEF26Q96DR7 871 aa19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 THAP2Q9H0W7 228 aa19.21■□□□□ 0.67
KLHDC3-201ENST00000244670 GNRH1P01148 92 aa19.2■□□□□ 0.66
KLHDC3-201ENST00000244670 FTLP02792 175 aaPredicted RBP19.2■□□□□ 0.66
KLHDC3-201ENST00000244670 WEE2P0C1S8 567 aa19.2■□□□□ 0.66
KLHDC3-201ENST00000244670 AKAP5P24588 427 aa19.2■□□□□ 0.66
KLHDC3-201ENST00000244670 AXLP30530 894 aa19.2■□□□□ 0.66
KLHDC3-201ENST00000244670 POU5F1Q01860 360 aaKnown RBP19.2■□□□□ 0.66
KLHDC3-201ENST00000244670 CKAP4Q07065 602 aaKnown RBP19.2■□□□□ 0.66
KLHDC3-201ENST00000244670 MEI1Q5TIA1 1274 aa19.2■□□□□ 0.66
KLHDC3-201ENST00000244670 RNF180Q86T96 592 aa19.2■□□□□ 0.66
KLHDC3-201ENST00000244670 RSPH3Q86UC2 560 aa19.2■□□□□ 0.66
KLHDC3-201ENST00000244670 SERINC5Q86VE9 423 aa19.2■□□□□ 0.66
KLHDC3-201ENST00000244670 CTNNBL1Q8WYA6 563 aaPredicted RBP19.2■□□□□ 0.66
KLHDC3-201ENST00000244670 PACSIN2Q9UNF0 486 aaPredicted RBP19.2■□□□□ 0.66
KLHDC3-201ENST00000244670 TRPV2Q9Y5S1 764 aa19.2■□□□□ 0.66
KLHDC3-201ENST00000244670 TMEM253P0C7T8 217 aa19.19■□□□□ 0.66
KLHDC3-201ENST00000244670 TCP1P17987 556 aaKnown RBP19.19■□□□□ 0.66
KLHDC3-201ENST00000244670 POLR2BP30876 1174 aaKnown RBP19.19■□□□□ 0.66
KLHDC3-201ENST00000244670 SSTR3P32745 418 aaPredicted RBP19.19■□□□□ 0.66
KLHDC3-201ENST00000244670 ASPAP45381 313 aa19.19■□□□□ 0.66
KLHDC3-201ENST00000244670 PTGISQ16647 500 aa19.19■□□□□ 0.66
KLHDC3-201ENST00000244670 UBR7Q8N806 425 aa19.19■□□□□ 0.66
KLHDC3-201ENST00000244670 LRRC57Q8N9N7 239 aa19.19■□□□□ 0.66
KLHDC3-201ENST00000244670 MSANTD4Q8NCY6 345 aa19.19■□□□□ 0.66
KLHDC3-201ENST00000244670 CXorf38Q8TB03 319 aa19.19■□□□□ 0.66
KLHDC3-201ENST00000244670 CAGE1Q8TC20 777 aa19.19■□□□□ 0.66
KLHDC3-201ENST00000244670 SNX27Q96L92 541 aa19.19■□□□□ 0.66
KLHDC3-201ENST00000244670 PNKPQ96T60 521 aa19.19■□□□□ 0.66
KLHDC3-201ENST00000244670 GOLPH3Q9H4A6 298 aa19.19■□□□□ 0.66
KLHDC3-201ENST00000244670 OSGEPQ9NPF4 335 aa19.19■□□□□ 0.66
KLHDC3-201ENST00000244670 PCDHB2Q9Y5E7 798 aa19.19■□□□□ 0.66
KLHDC3-201ENST00000244670 NCANO14594 1321 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms