RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 OR6J1Q8NGC5 347 aa19.76■□□□□ 0.75
HOXC11-201ENST00000243082 CPA4Q9UI42 421 aa19.76■□□□□ 0.75
HOXC11-201ENST00000243082 ZSWIM8A7E2V4 1837 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 BHMG1C9JSJ3 638 aaPredicted RBP19.75■□□□□ 0.75
HOXC11-201ENST00000243082 TMEM191BP0C7N4 346 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 CXCL8P10145 99 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 TRADDQ15628 312 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 TRIM72Q6ZMU5 477 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 MON1BQ7L1V2 547 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 CAVIN3Q969G5 261 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 NIF3L1Q9GZT8 377 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 XYLT2Q9H1B5 865 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 RPF1Q9H9Y2 349 aaKnown RBP19.75■□□□□ 0.75
HOXC11-201ENST00000243082 MEFVO15553 781 aaPredicted RBP19.75■□□□□ 0.75
HOXC11-201ENST00000243082 MYBL1P10243 752 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 RRM1P23921 792 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 NSFP46459 744 aaKnown RBP19.75■□□□□ 0.75
HOXC11-201ENST00000243082 AARSP49588 968 aaKnown RBP eCLIP19.75■□□□□ 0.75
HOXC11-201ENST00000243082 NOMO3P69849 1222 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 PPFIA1Q13136 1202 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 TRPC3Q13507 836 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 TERF2Q15554 542 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 GRIK4Q16099 956 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 DGKDQ16760 1214 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 AADACL2Q6P093 401 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 TRIM11Q96F44 468 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 ACBD3Q9H3P7 528 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 PDZD7Q9H5P4 517 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 SLITRK6Q9H5Y7 841 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 NFU1Q9UMS0 254 aa19.75■□□□□ 0.75
HOXC11-201ENST00000243082 ANK1P16157 1881 aa19.74■□□□□ 0.75
HOXC11-201ENST00000243082 MROH7Q68CQ1 1323 aa19.74■□□□□ 0.75
HOXC11-201ENST00000243082 IL18RAPO95256 599 aa19.74■□□□□ 0.75
HOXC11-201ENST00000243082 MCF2P10911 925 aa19.74■□□□□ 0.75
HOXC11-201ENST00000243082 CTNNA2P26232 953 aa19.74■□□□□ 0.75
HOXC11-201ENST00000243082 SSTR3P32745 418 aaPredicted RBP19.74■□□□□ 0.75
HOXC11-201ENST00000243082 CTNNA1P35221 906 aaKnown RBP19.74■□□□□ 0.75
HOXC11-201ENST00000243082 HUNKP57058 714 aa19.74■□□□□ 0.75
HOXC11-201ENST00000243082 POU5F1Q01860 360 aaKnown RBP19.74■□□□□ 0.75
HOXC11-201ENST00000243082 C2CD6Q53TS8 623 aa19.74■□□□□ 0.75
HOXC11-201ENST00000243082 MORN1Q5T089 497 aa19.74■□□□□ 0.75
HOXC11-201ENST00000243082 PASD1Q8IV76 773 aa19.74■□□□□ 0.75
HOXC11-201ENST00000243082 ZNF606Q8WXB4 792 aa19.74■□□□□ 0.75
HOXC11-201ENST00000243082 IFT81Q8WYA0 676 aa19.74■□□□□ 0.75
HOXC11-201ENST00000243082 ANKRD36BP1Q96IX9 119 aa19.74■□□□□ 0.75
HOXC11-201ENST00000243082 CPB2Q96IY4 423 aa19.74■□□□□ 0.75
HOXC11-201ENST00000243082 NAP1L3Q99457 506 aaPredicted RBP19.74■□□□□ 0.75
HOXC11-201ENST00000243082 PCDHA3Q9Y5H8 950 aa19.74■□□□□ 0.75
HOXC11-201ENST00000243082 IGF2BP3O00425 579 aaKnown RBP eCLIP19.73■□□□□ 0.75
HOXC11-201ENST00000243082 THAP12O43422 761 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 TNNC2P02585 160 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 STAG3L1P0CL83 205 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 ARF4P18085 180 aaPredicted RBP19.73■□□□□ 0.75
HOXC11-201ENST00000243082 PAK2Q13177 524 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 GLIPR1L2Q4G1C9 344 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 LLGL2Q6P1M3 1020 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 KIAA0319LQ8IZA0 1049 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 CISHQ9NSE2 258 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 SLC5A4Q9NY91 659 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 AMACRQ9UHK6 382 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 MGAMO43451 1857 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 ZNF236Q9UL36 1845 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 CCDC66A2RUB6 948 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 LACTBL1A8MY62 500 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 SPOPO43791 374 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 ZEB2O60315 1214 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 ITGBL1O95965 494 aaPredicted RBP19.73■□□□□ 0.75
HOXC11-201ENST00000243082 TNFAIP2Q03169 654 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 CLUL1Q15846 466 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 ZNF699Q32M78 642 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 PRAMEF19Q5SWL8 479 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 PHLDB2Q86SQ0 1253 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 TRIM7Q9C029 511 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 ERVK-5Q9HDB9 667 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 ANAPC7Q9UJX3 599 aa19.73■□□□□ 0.75
HOXC11-201ENST00000243082 ECM2O94769 699 aaPredicted RBP19.72■□□□□ 0.75
HOXC11-201ENST00000243082 FAM153BP0C7A2 387 aa19.72■□□□□ 0.75
HOXC11-201ENST00000243082 PYGMP11217 842 aa19.72■□□□□ 0.75
HOXC11-201ENST00000243082 CD58P19256 250 aa19.72■□□□□ 0.75
HOXC11-201ENST00000243082 ASPAP45381 313 aa19.72■□□□□ 0.75
HOXC11-201ENST00000243082 PTP4A2Q12974 167 aa19.72■□□□□ 0.75
HOXC11-201ENST00000243082 NNTQ13423 1086 aa19.72■□□□□ 0.75
HOXC11-201ENST00000243082 FAM153CQ494X1 144 aa19.72■□□□□ 0.75
HOXC11-201ENST00000243082 ADAT2Q7Z6V5 191 aaKnown RBP19.72■□□□□ 0.75
HOXC11-201ENST00000243082 PHF13Q86YI8 300 aaPredicted RBP19.72■□□□□ 0.75
HOXC11-201ENST00000243082 NLRP7Q8WX94 980 aa19.72■□□□□ 0.75
HOXC11-201ENST00000243082 CCDC102AQ96A19 550 aa19.72■□□□□ 0.75
HOXC11-201ENST00000243082 FAM153AQ9UHL3 310 aa19.72■□□□□ 0.75
HOXC11-201ENST00000243082 SIX4Q9UIU6 781 aa19.72■□□□□ 0.75
HOXC11-201ENST00000243082 AGPSO00116 658 aa19.71■□□□□ 0.75
HOXC11-201ENST00000243082 SYF2O95926 243 aaKnown RBP19.71■□□□□ 0.75
HOXC11-201ENST00000243082 NFICP08651 508 aa19.71■□□□□ 0.75
HOXC11-201ENST00000243082 WEE2P0C1S8 567 aa19.71■□□□□ 0.75
HOXC11-201ENST00000243082 MAP2K5Q13163 448 aa19.71■□□□□ 0.75
HOXC11-201ENST00000243082 RASAL3Q86YV0 1011 aa19.71■□□□□ 0.75
HOXC11-201ENST00000243082 TSEN2Q8NCE0 465 aaKnown RBP19.71■□□□□ 0.75
HOXC11-201ENST00000243082 CCDC26Q8TAB7 109 aa19.71■□□□□ 0.75
HOXC11-201ENST00000243082 VCPIP1Q96JH7 1222 aa19.71■□□□□ 0.75
HOXC11-201ENST00000243082 C11orf70Q9BRQ4 267 aa19.71■□□□□ 0.75
HOXC11-201ENST00000243082 MED4Q9NPJ6 270 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms