RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 KCTD19Q17RG1 926 aaPredicted RBP17.24■□□□□ 0.35
UBE3D-201ENST00000237186 LY6KQ17RY6 165 aa17.24■□□□□ 0.35
UBE3D-201ENST00000237186 CELF3Q5SZQ8 465 aaKnown RBP17.24■□□□□ 0.35
UBE3D-201ENST00000237186 TTC19Q6DKK2 380 aaPredicted RBP17.24■□□□□ 0.35
UBE3D-201ENST00000237186 DLK2Q6UY11 383 aa17.24■□□□□ 0.35
UBE3D-201ENST00000237186 SYDE1Q6ZW31 735 aaPredicted RBP17.24■□□□□ 0.35
UBE3D-201ENST00000237186 FGD4Q96M96 766 aa17.24■□□□□ 0.35
UBE3D-201ENST00000237186 ADAM22Q9P0K1 906 aa17.24■□□□□ 0.35
UBE3D-201ENST00000237186 KCNH4Q9UQ05 1017 aa17.24■□□□□ 0.35
UBE3D-201ENST00000237186 DNAJC25-GNG10A0A024R161 153 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 ZBTB42B2RXF5 422 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 ABLIM1O14639 778 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 OGTO15294 1046 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 PSTPIP1O43586 416 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 ECEL1O95672 775 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 GUCY1A3Q02108 690 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 LAMTOR4Q0VGL1 99 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 SLMAPQ14BN4 828 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 CROCCP2Q86T23 111 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 TLCD1Q96CP7 247 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 JPH2Q9BR39 696 aaPredicted RBP17.23■□□□□ 0.35
UBE3D-201ENST00000237186 TMEM109Q9BVC6 243 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 IMPG2Q9BZV3 1241 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 C2orf40Q9H1Z8 148 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 WHRNQ9P202 907 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 FEZ2Q9UHY8 353 aaPredicted RBP17.23■□□□□ 0.35
UBE3D-201ENST00000237186 LCMT1Q9UIC8 334 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 AGTPBP1Q9UPW5 1226 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 SCINQ9Y6U3 715 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 SIP14410 1827 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 SRCAPQ6ZRS2 3230 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 UMODL1Q5DID0 1318 aa17.23■□□□□ 0.35
UBE3D-201ENST00000237186 MYH9P35579 1960 aaKnown RBP17.23■□□□□ 0.35
UBE3D-201ENST00000237186 LOC102724159A0A0B4J2E5 919 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 SPDYE5A6NIY4 337 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 TTLL13PA6NNM8 815 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 ADM5C9JUS6 153 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 MYO1CO00159 1063 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 EBAG9O00559 213 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 ARIH2O95376 493 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 CST3P01034 146 aaPredicted RBP17.22■□□□□ 0.35
UBE3D-201ENST00000237186 CFHP08603 1231 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 RARGP13631 454 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 PROZP22891 400 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 SLC26A2P50443 739 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 PWP2Q15269 919 aaKnown RBP17.22■□□□□ 0.35
UBE3D-201ENST00000237186 PTGISQ16647 500 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 KRT71Q3SY84 523 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 SGO2Q562F6 1265 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 HOOK3Q86VS8 718 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.22■□□□□ 0.35
UBE3D-201ENST00000237186 RNF25Q96BH1 459 aaPredicted RBP17.22■□□□□ 0.35
UBE3D-201ENST00000237186 PGM2Q96G03 612 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 HOMER3Q9NSC5 361 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 RBPJLQ9UBG7 517 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 CPSF3Q9UKF6 684 aaKnown RBP17.22■□□□□ 0.35
UBE3D-201ENST00000237186 POLR2AP24928 1970 aaKnown RBP17.22■□□□□ 0.35
UBE3D-201ENST00000237186 PAPPA2Q9BXP8 1791 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 KCNJ1P48048 391 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 PPP2R2AP63151 447 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 IFFO1Q0D2I5 559 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 BYSLQ13895 437 aaKnown RBP17.22■□□□□ 0.35
UBE3D-201ENST00000237186 MAPK6Q16659 721 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 DUOXA2Q1HG44 320 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 HSDL1Q3SXM5 330 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 DPY19L2Q6NUT2 758 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 CCDC62Q6P9F0 684 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 ZBTB8OSQ8IWT0 167 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 RHOT1Q8IXI2 618 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 ANKRD13AQ8IZ07 590 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 ZNF606Q8WXB4 792 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 PAGR1Q9BTK6 254 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 CENPHQ9H3R5 247 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 ELP3Q9H9T3 547 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 PTPRHQ9HD43 1115 aa17.22■□□□□ 0.35
UBE3D-201ENST00000237186 LSM8O95777 96 aaKnown RBP17.21■□□□□ 0.35
UBE3D-201ENST00000237186 PAEPP09466 180 aa17.21■□□□□ 0.35
UBE3D-201ENST00000237186 MMP8P22894 467 aa17.21■□□□□ 0.35
UBE3D-201ENST00000237186 TNFSF9P41273 254 aa17.21■□□□□ 0.35
UBE3D-201ENST00000237186 CCT5P48643 541 aa17.21■□□□□ 0.35
UBE3D-201ENST00000237186 KLF1Q13351 362 aaPredicted RBP17.21■□□□□ 0.35
UBE3D-201ENST00000237186 PLCB4Q15147 1175 aa17.21■□□□□ 0.35
UBE3D-201ENST00000237186 ZNF568Q3ZCX4 644 aa17.21■□□□□ 0.35
UBE3D-201ENST00000237186 DENND2CQ68D51 928 aa17.21■□□□□ 0.35
UBE3D-201ENST00000237186 KATNAL2Q8IYT4 538 aa17.21■□□□□ 0.35
UBE3D-201ENST00000237186 C11orf70Q9BRQ4 267 aa17.21■□□□□ 0.35
UBE3D-201ENST00000237186 FAM107BQ9H098 131 aa17.21■□□□□ 0.35
UBE3D-201ENST00000237186 R3HDMLQ9H3Y0 253 aa17.21■□□□□ 0.35
UBE3D-201ENST00000237186 FZD8Q9H461 694 aa17.21■□□□□ 0.35
UBE3D-201ENST00000237186 PARVAQ9NVD7 372 aa17.21■□□□□ 0.35
UBE3D-201ENST00000237186 NOVA2Q9UNW9 492 aaKnown RBP17.21■□□□□ 0.35
UBE3D-201ENST00000237186 ACKR2O00590 384 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 NDUFAB1O14561 156 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 TP73O15350 636 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 THAP12O43422 761 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 PRKCBP05771 671 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 CORO7P57737 925 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 PPIL2Q13356 520 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 MOGSQ13724 837 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 SLC29A2Q14542 456 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms