RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 ZNF75CPQ92670 426 aaPredicted RBP13.75□□□□□ -0.21
MSH2-201ENST00000233146 CCDC127Q96BQ5 260 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 TTC25Q96NG3 672 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 DCTN4Q9UJW0 460 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 CLEC11AQ9Y240 323 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 KAT6BQ8WYB5 2073 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 FRMPD4Q14CM0 1322 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 PTPN2P17706 415 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 PLCG1P19174 1290 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 PHBP35232 272 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 ARHGAP4P98171 946 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 IFIT5Q13325 482 aaKnown RBP13.75□□□□□ -0.21
MSH2-201ENST00000233146 PDAP1Q13442 181 aaKnown RBP13.75□□□□□ -0.21
MSH2-201ENST00000233146 APOFQ13790 326 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 CYTH1Q15438 398 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 USP41Q3LFD5 358 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 PCNX4Q63HM2 1172 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 ANO5Q75V66 913 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 COPS6Q7L5N1 327 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 ZNF713Q8N859 430 aaPredicted RBP13.75□□□□□ -0.21
MSH2-201ENST00000233146 GPATCH1Q9BRR8 931 aaKnown RBP13.75□□□□□ -0.21
MSH2-201ENST00000233146 ZNF696Q9H7X3 374 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 SLC38A7Q9NVC3 462 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 SLC7A8Q9UHI5 535 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 PRELID1Q9Y255 219 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 FRMD4BQ9Y2L6 1034 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 LMO7Q8WWI1 1683 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 DYTNA2CJ06 578 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 TXNDC9O14530 226 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 PABPC1P11940 636 aaKnown RBP13.75□□□□□ -0.21
MSH2-201ENST00000233146 ANXA13P27216 316 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 CTTNQ14247 550 aaKnown RBP13.75□□□□□ -0.21
MSH2-201ENST00000233146 KRT81Q14533 505 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 TLR1Q15399 786 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 FAM91A1Q658Y4 838 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 ULK2Q8IYT8 1036 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 ALG3Q92685 438 aa13.75□□□□□ -0.21
MSH2-201ENST00000233146 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.75□□□□□ -0.21
MSH2-201ENST00000233146 TIAM2Q8IVF5 1701 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 TIMM44O43615 452 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 CHKAP35790 457 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 KCNC4Q03721 635 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 CALCOCO2Q13137 446 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 MFSD6Q6ZSS7 791 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 TRABD2AQ86V40 505 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 PPP1R14CQ8TAE6 165 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 ARMC7Q9H6L4 198 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 CLK4Q9HAZ1 481 aaKnown RBP13.74□□□□□ -0.21
MSH2-201ENST00000233146 PARVBQ9HBI1 364 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 TBC1D23Q9NUY8 699 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 RABL2AQ9UBK7 228 aaPredicted RBP13.74□□□□□ -0.21
MSH2-201ENST00000233146 RSL24D1Q9UHA3 163 aaKnown RBP13.74□□□□□ -0.21
MSH2-201ENST00000233146 ADAMTS6Q9UKP5 1117 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 FLT1P17948 1338 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 PCDH11YQ9BZA8 1340 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 B2RBV5 119 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 ADAMTS3O15072 1205 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 ITM2AO43736 263 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 CNOT3O75175 753 aaKnown RBP13.74□□□□□ -0.21
MSH2-201ENST00000233146 ATP6V1B1P15313 513 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 PRKCIP41743 596 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 NR1H2P55055 460 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 RPS3AP61247 264 aaKnown RBP13.74□□□□□ -0.21
MSH2-201ENST00000233146 ZBTB17Q13105 803 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 RASGRF1Q13972 1273 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 SPOPLQ6IQ16 392 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 FOXR2Q6PJQ5 311 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 MPRIPQ6WCQ1 1025 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 AHI1Q8N157 1196 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 GDPD5Q8WTR4 605 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 OSGEPQ9NPF4 335 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 COL4A3BPQ9Y5P4 624 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 SNX9Q9Y5X1 595 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 CDH3P22223 829 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 PEX2P28328 305 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 GNA11P29992 359 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 CDK16Q00536 496 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 CREB5Q02930 508 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 SNAPC2Q13487 334 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 C1orf146Q5VVC0 180 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 NIPAL1Q6NVV3 410 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 AADACL2Q6P093 401 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 DCLRE1AQ6PJP8 1040 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 ANKRD13DQ6ZTN6 518 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 BPHLQ86WA6 291 aaPredicted RBP13.74□□□□□ -0.21
MSH2-201ENST00000233146 EFHD2Q96C19 240 aaPredicted RBP13.74□□□□□ -0.21
MSH2-201ENST00000233146 CLPTM1LQ96KA5 538 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 RIC8AQ9NPQ8 531 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 FBXO6Q9NRD1 293 aaPredicted RBP13.74□□□□□ -0.21
MSH2-201ENST00000233146 TRNAU1APQ9NX07 287 aaKnown RBP13.74□□□□□ -0.21
MSH2-201ENST00000233146 WHRNQ9P202 907 aa13.74□□□□□ -0.21
MSH2-201ENST00000233146 ARPP21Q9UBL0 812 aaPredicted RBP13.74□□□□□ -0.21
MSH2-201ENST00000233146 PEX1O43933 1283 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 CIAO1O76071 339 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 CHRNB2P17787 502 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 CDK9P50750 372 aaKnown RBP13.73□□□□□ -0.21
MSH2-201ENST00000233146 HIRAP54198 1017 aaPredicted RBP13.73□□□□□ -0.21
MSH2-201ENST00000233146 BTKQ06187 659 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 SLC1A5Q15758 541 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 VASH1Q7L8A9 365 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms