RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 PWWP2AQ96N64 755 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 PCDHB18PQ96TA0 734 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 SIX2Q9NPC8 291 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 COG5Q9UP83 839 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 NEDD9Q14511 834 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 HES6Q96HZ4 224 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 LBHD1Q9BQE6 289 aaPredicted RBP14.4□□□□□ -0.1
RAB3D-201ENST00000222120 DNAI2Q9GZS0 605 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 CDC42EP4Q9H3Q1 356 aaKnown RBP14.4□□□□□ -0.1
RAB3D-201ENST00000222120 SLC38A10Q9HBR0 1119 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 IP6K2Q9UHH9 426 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 TCRBV7S2A1N4TA0A589 114 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 M0QYV0 167 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 OPLAHO14841 1288 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 CUL2Q13617 745 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 ANO5Q75V66 913 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 DPP9Q86TI2 863 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 PACS2Q86VP3 889 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 CFAP36Q96G28 342 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 RPS6KC1Q96S38 1066 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 KIAA1683Q9H0B3 1180 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 DCTN4Q9UJW0 460 aa14.4□□□□□ -0.1
RAB3D-201ENST00000222120 ASTN2O75129 1339 aaPredicted RBP14.4□□□□□ -0.1
RAB3D-201ENST00000222120 KRT3P12035 628 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 MUTP22033 750 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 SCYL3Q8IZE3 742 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 PDIK1LQ8N165 341 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 PRELID2Q8N945 189 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 LRRC57Q8N9N7 239 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 TMEM161BQ8NDZ6 487 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 PRPF31Q8WWY3 499 aaKnown RBP14.39□□□□□ -0.11
RAB3D-201ENST00000222120 RILPQ96NA2 401 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 DCDC2CA8MYV0 355 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 CCNE2O96020 404 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 CALB1P05937 261 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 RGS7P49802 495 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 FAM102AQ5T9C2 384 aaPredicted RBP14.39□□□□□ -0.11
RAB3D-201ENST00000222120 DAW1Q8N136 415 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 MCUR1Q96AQ8 359 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 GPRASP2Q96D09 838 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 KREMEN1Q96MU8 473 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 MIS12Q9H081 205 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 IRS2Q9Y4H2 1338 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 PRPSAP2O60256 369 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 AGTP01019 485 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 OATP04181 439 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 FDX1P10109 184 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 VPS52Q8N1B4 723 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 SEPT1Q8WYJ6 367 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 SENP7Q9BQF6 1050 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 TRAIPQ9BWF2 469 aa14.39□□□□□ -0.11
RAB3D-201ENST00000222120 ACTR5Q9H9F9 607 aaPredicted RBP14.39□□□□□ -0.11
RAB3D-201ENST00000222120 TULP2O00295 520 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 TROVE2P10155 538 aaKnown RBP eCLIP14.38□□□□□ -0.11
RAB3D-201ENST00000222120 ITIH2P19823 946 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 TCF7P36402 384 aaPredicted RBP14.38□□□□□ -0.11
RAB3D-201ENST00000222120 SLC20A2Q08357 652 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 NME8Q8N427 588 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 RNF34Q969K3 372 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 PHLPP1O60346 1717 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 TXNP10599 105 aaKnown RBP14.38□□□□□ -0.11
RAB3D-201ENST00000222120 IFRD2Q12894 506 aaPredicted RBP14.38□□□□□ -0.11
RAB3D-201ENST00000222120 ATP13A4Q4VNC1 1196 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 C1orf228Q6PIY5 440 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 CCDC110Q8TBZ0 833 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 N4BP2L2Q92802 583 aaPredicted RBP14.38□□□□□ -0.11
RAB3D-201ENST00000222120 A1CFQ9NQ94 594 aaKnown RBP14.38□□□□□ -0.11
RAB3D-201ENST00000222120 NEU2Q9Y3R4 380 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 MED7O43513 233 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 MT-ND3P03897 115 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 MYL6P60660 151 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 FKBP1AP62942 108 aaKnown RBP14.38□□□□□ -0.11
RAB3D-201ENST00000222120 FMO1Q01740 532 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 TMEM62Q0P6H9 643 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 KIF22Q14807 665 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 TRIM68Q6AZZ1 485 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 OR6B3Q8NGW1 331 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 TRAPPC12Q8WVT3 735 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 TTC17Q96AE7 1141 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 MBOAT7Q96N66 472 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 SLC1A1P43005 524 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 SLC8A3P57103 927 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 FOXR2Q6PJQ5 311 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 KIF2BQ8N4N8 673 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 EMC1Q8N766 993 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 FEZF2Q8TBJ5 459 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 C10orf88Q9H8K7 445 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 KLC4Q9NSK0 619 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 UBIAD1Q9Y5Z9 338 aa14.38□□□□□ -0.11
RAB3D-201ENST00000222120 CACNA1SQ13698 1873 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 MAFGO15525 162 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 MYBL1P10243 752 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 CLCN3P51790 818 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 GTF2BQ00403 316 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 MCOLN2Q8IZK6 566 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 MSL3Q8N5Y2 521 aaKnown RBP14.37□□□□□ -0.11
RAB3D-201ENST00000222120 UBA3Q8TBC4 463 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 A0A0G2JND7 137 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 PIAS1O75925 651 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 SUPT20HL2P0C7V6 817 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms