RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 CENPOQ9BU64 300 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 ASCC2Q9H1I8 757 aaPredicted RBP8.4□□□□□ -1.07
SCG3-201ENST00000220478 LRRC19Q9H756 370 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 CREBZFQ9NS37 354 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 TYW1Q9NV66 732 aaKnown RBP8.4□□□□□ -1.07
SCG3-201ENST00000220478 PCDHGB7Q9Y5F8 929 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 SYNGAP1Q96PV0 1343 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 PRPF4O43172 522 aaKnown RBP eCLIP8.39□□□□□ -1.07
SCG3-201ENST00000220478 HNRNPRO43390 633 aaKnown RBP8.39□□□□□ -1.07
SCG3-201ENST00000220478 NR2F2P24468 414 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 CRABP2P29373 138 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 GYG1P46976 350 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 SLC12A3P55017 1021 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 GPSM2P81274 684 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 PABPC4Q13310 644 aaKnown RBP eCLIP8.39□□□□□ -1.075e-6■■■□□ 19
SCG3-201ENST00000220478 Q3C1V9 767 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 SLC45A4Q5BKX6 768 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 KRT28Q7Z3Y7 464 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 KRT25Q7Z3Z0 450 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 DGKHQ86XP1 1220 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 MYLK4Q86YV6 388 aaPredicted RBP8.39□□□□□ -1.07
SCG3-201ENST00000220478 RELL1Q8IUW5 271 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 DTX3LQ8TDB6 740 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 SETDB2Q96T68 719 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 HOMER2Q9NSB8 354 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 CCDC87Q9NVE4 849 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 WHRNQ9P202 907 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 PLA2G4CQ9UP65 541 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 INPP5FQ9Y2H2 1132 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 RABGAP1Q9Y3P9 1069 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 A0A0J9YVX5 310 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 SMCO2A6NFE2 343 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 VILLO15195 856 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 MAPK13O15264 365 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 LMNAP02545 664 aaKnown RBP8.39□□□□□ -1.07
SCG3-201ENST00000220478 HOXA7P31268 230 aaPredicted RBP8.39□□□□□ -1.07
SCG3-201ENST00000220478 RPA3P35244 121 aaPredicted RBP8.39□□□□□ -1.07
SCG3-201ENST00000220478 RFC4P35249 363 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 CLK1P49759 484 aaKnown RBP8.39□□□□□ -1.07
SCG3-201ENST00000220478 TBL3Q12788 808 aaKnown RBP8.39□□□□□ -1.07
SCG3-201ENST00000220478 STRN3Q13033 797 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 MSLNQ13421 630 aaPredicted RBP8.39□□□□□ -1.07
SCG3-201ENST00000220478 HNRNPDQ14103 355 aaKnown RBP8.39□□□□□ -1.07
SCG3-201ENST00000220478 CALCRLQ16602 461 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 INTS8Q75QN2 995 aaKnown RBP8.39□□□□□ -1.07
SCG3-201ENST00000220478 CCDC25Q86WR0 208 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 STKLD1Q8NE28 680 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 SNX29Q8TEQ0 813 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 FBXO41Q8TF61 875 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 NAT14Q8WUY8 206 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 SKA1Q96BD8 255 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 DYNLL2Q96FJ2 89 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 RUNDC3BQ96NL0 473 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 BTBD10Q9BSF8 475 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 YIPF2Q9BWQ6 316 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 TAS2R1Q9NYW7 299 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 COMMD3-BMI1R4GMX3 469 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 ZNF862O60290 1169 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 LRRN2O75325 713 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 SPAG7O75391 227 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 ADAMTS2O95450 1211 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 USP17L8P0C7I0 530 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 SMIM18P0DKX4 95 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 VARSP26640 1264 aaKnown RBP8.39□□□□□ -1.07
SCG3-201ENST00000220478 SOX5P35711 763 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 MAP3K10Q02779 954 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 CHRNDQ07001 517 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 LMBRD2Q68DH5 695 aaPredicted RBP8.39□□□□□ -1.07
SCG3-201ENST00000220478 ARHGEF18Q6ZSZ5 1173 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 NLRP9Q7RTR0 991 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 TAS1R3Q7RTX0 852 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 SLC13A5Q86YT5 568 aaPredicted RBP8.39□□□□□ -1.07
SCG3-201ENST00000220478 LMO3Q8TAP4 145 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 SLC20A1Q8WUM9 679 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 DDX17Q92841 729 aaKnown RBP8.39□□□□□ -1.07
SCG3-201ENST00000220478 SPZ1Q9BXG8 430 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 SAR1AQ9NR31 198 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 GCNT4Q9P109 453 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 MTRF1LQ9UGC7 380 aaKnown RBP8.39□□□□□ -1.07
SCG3-201ENST00000220478 PARP2Q9UGN5 583 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 RASAL2Q9UJF2 1139 aa8.39□□□□□ -1.07
SCG3-201ENST00000220478 ABCA3Q99758 1704 aa8.38□□□□□ -1.07
SCG3-201ENST00000220478 FAM47DPA6NHR8 397 aa8.38□□□□□ -1.07
SCG3-201ENST00000220478 ITGA2BP08514 1039 aa8.38□□□□□ -1.07
SCG3-201ENST00000220478 GYS1P13807 737 aa8.38□□□□□ -1.07
SCG3-201ENST00000220478 KLRK1P26718 216 aa8.38□□□□□ -1.07
SCG3-201ENST00000220478 SLC18A1P54219 525 aa8.38□□□□□ -1.07
SCG3-201ENST00000220478 ORC2Q13416 577 aaPredicted RBP8.38□□□□□ -1.07
SCG3-201ENST00000220478 DDB1Q16531 1140 aa8.38□□□□□ -1.07
SCG3-201ENST00000220478 TMEM95Q3KNT9 176 aa8.38□□□□□ -1.07
SCG3-201ENST00000220478 TBC1D9BQ66K14 1250 aa8.38□□□□□ -1.07
SCG3-201ENST00000220478 C14orf80Q86SX3 495 aa8.38□□□□□ -1.07
SCG3-201ENST00000220478 CABLES1Q8TDN4 633 aa8.38□□□□□ -1.07
SCG3-201ENST00000220478 GJD4Q96KN9 370 aaPredicted RBP8.38□□□□□ -1.07
SCG3-201ENST00000220478 PAIP2Q9BPZ3 127 aaKnown RBP8.38□□□□□ -1.07
SCG3-201ENST00000220478 RBM38Q9H0Z9 239 aaKnown RBP8.38□□□□□ -1.07
SCG3-201ENST00000220478 EBF3Q9H4W6 596 aa8.38□□□□□ -1.07
SCG3-201ENST00000220478 INIPQ9NRY2 104 aa8.38□□□□□ -1.07
SCG3-201ENST00000220478 CHST7Q9NS84 486 aa8.38□□□□□ -1.07
SCG3-201ENST00000220478 TRMT112Q9UI30 125 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms