RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 CARD9Q9H257 536 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 TLL2Q9Y6L7 1015 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 UMODL1Q5DID0 1318 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 SMIM35A0A1B0GVV1 85 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 CCDC188H7C350 402 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 THAP12O43422 761 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 RNASE9P60153 205 aaKnown RBP18.6■□□□□ 0.57
VRK1-201ENST00000216639 CENPCQ03188 943 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 MFSD10Q14728 455 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 PCBP1Q15365 356 aaKnown RBP eCLIP18.6■□□□□ 0.57
VRK1-201ENST00000216639 UBR7Q8N806 425 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 KATNAL1Q9BW62 490 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 AVENQ9NQS1 362 aaPredicted RBP18.6■□□□□ 0.57
VRK1-201ENST00000216639 FAM53CQ9NYF3 392 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 STIM2Q9P246 746 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 TTC7AQ9ULT0 858 aaPredicted RBP18.6■□□□□ 0.57
VRK1-201ENST00000216639 NOC2LQ9Y3T9 749 aaKnown RBP18.6■□□□□ 0.57
VRK1-201ENST00000216639 A0A1B0GUA9 196 aa18.59■□□□□ 0.57
VRK1-201ENST00000216639 LACTBL1A8MY62 500 aa18.59■□□□□ 0.57
VRK1-201ENST00000216639 DDX3YO15523 660 aaKnown RBP18.59■□□□□ 0.57
VRK1-201ENST00000216639 KRT19P08727 400 aa18.59■□□□□ 0.57
VRK1-201ENST00000216639 MESDQ14696 234 aa18.59■□□□□ 0.57
VRK1-201ENST00000216639 CCL14Q16627 93 aa18.59■□□□□ 0.57
VRK1-201ENST00000216639 DCAF4L1Q3SXM0 396 aa18.59■□□□□ 0.57
VRK1-201ENST00000216639 LIN9Q5TKA1 542 aa18.59■□□□□ 0.57
VRK1-201ENST00000216639 MCOLN2Q8IZK6 566 aa18.59■□□□□ 0.57
VRK1-201ENST00000216639 FUT8Q9BYC5 575 aa18.59■□□□□ 0.57
VRK1-201ENST00000216639 FAM49AQ9H0Q0 323 aaPredicted RBP18.59■□□□□ 0.57
VRK1-201ENST00000216639 WNT8AQ9H1J5 351 aa18.59■□□□□ 0.57
VRK1-201ENST00000216639 TMEM59LQ9UK28 342 aa18.59■□□□□ 0.57
VRK1-201ENST00000216639 GJD2Q9UKL4 321 aa18.59■□□□□ 0.57
VRK1-201ENST00000216639 PASKQ96RG2 1323 aa18.58■□□□□ 0.57
VRK1-201ENST00000216639 KAT6AQ92794 2004 aa18.58■□□□□ 0.57
VRK1-201ENST00000216639 MBLAC1A4D2B0 266 aaPredicted RBP18.58■□□□□ 0.57
VRK1-201ENST00000216639 TMEM110-MUSTN1A8MSY1 372 aa18.58■□□□□ 0.57
VRK1-201ENST00000216639 ATMINO43313 823 aaPredicted RBP18.58■□□□□ 0.57
VRK1-201ENST00000216639 CYP2C9P11712 490 aa18.58■□□□□ 0.57
VRK1-201ENST00000216639 PSEN2P49810 448 aa18.58■□□□□ 0.57
VRK1-201ENST00000216639 ZNF132P52740 706 aa18.58■□□□□ 0.57
VRK1-201ENST00000216639 NAA35Q5VZE5 725 aa18.58■□□□□ 0.57
VRK1-201ENST00000216639 CCNI2Q6ZMN8 369 aaPredicted RBP18.58■□□□□ 0.57
VRK1-201ENST00000216639 NT5DC4Q86YG4 428 aa18.58■□□□□ 0.57
VRK1-201ENST00000216639 CD302Q8IX05 232 aa18.58■□□□□ 0.57
VRK1-201ENST00000216639 KAT2BQ92831 832 aa18.58■□□□□ 0.57
VRK1-201ENST00000216639 VCPIP1Q96JH7 1222 aa18.58■□□□□ 0.57
VRK1-201ENST00000216639 ACAP3Q96P50 834 aa18.58■□□□□ 0.57
VRK1-201ENST00000216639 CISHQ9NSE2 258 aa18.58■□□□□ 0.57
VRK1-201ENST00000216639 L1RE1Q9UN81 338 aa18.58■□□□□ 0.57
VRK1-201ENST00000216639 A0A0U1RQG5 324 aaPredicted RBP18.57■□□□□ 0.56
VRK1-201ENST00000216639 FAM155AB1AL88 458 aaPredicted RBP18.57■□□□□ 0.56
VRK1-201ENST00000216639 KRIT1O00522 736 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 CALCAP01258 141 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 MYL3P08590 195 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 NFICP08651 508 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 COMTP21964 271 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 ATICP31939 592 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 CRHR2Q13324 411 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 KIZQ2M2Z5 673 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 ZNF667Q5HYK9 610 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 JADE1Q6IE81 842 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 IFT20Q8IY31 132 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 TMEM192Q8IY95 271 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 CPA5Q8WXQ8 436 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 CYFIP2Q96F07 1278 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 KRT12Q99456 494 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 XYLT2Q9H1B5 865 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 ADAMTS10Q9H324 1103 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 SPOPO43791 374 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 P4HA1P13674 534 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 CD58P19256 250 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 CBX1P83916 185 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 GPS2Q13227 327 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 TMEM132DQ14C87 1099 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 ZNF606Q8WXB4 792 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 ZSWIM1Q9BR11 485 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 ACBD3Q9H3P7 528 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 MRPL47Q9HD33 250 aaKnown RBP18.57■□□□□ 0.56
VRK1-201ENST00000216639 ABT1Q9ULW3 272 aaKnown RBP18.57■□□□□ 0.56
VRK1-201ENST00000216639 C2CD2Q9Y426 696 aa18.57■□□□□ 0.56
VRK1-201ENST00000216639 MROH7Q68CQ1 1323 aa18.56■□□□□ 0.56
VRK1-201ENST00000216639 ANK1P16157 1881 aa18.56■□□□□ 0.56
VRK1-201ENST00000216639 CCDC66A2RUB6 948 aa18.56■□□□□ 0.56
VRK1-201ENST00000216639 HAS3O00219 553 aa18.56■□□□□ 0.56
VRK1-201ENST00000216639 MAP2K7O14733 419 aa18.56■□□□□ 0.56
VRK1-201ENST00000216639 ZMYND10O75800 440 aa18.56■□□□□ 0.56
VRK1-201ENST00000216639 LSM8O95777 96 aaKnown RBP18.56■□□□□ 0.56
VRK1-201ENST00000216639 AKR1A1P14550 325 aa18.56■□□□□ 0.56
VRK1-201ENST00000216639 TNFRSF8P28908 595 aa18.56■□□□□ 0.56
VRK1-201ENST00000216639 GRM5P41594 1212 aa18.56■□□□□ 0.56
VRK1-201ENST00000216639 ASPAP45381 313 aa18.56■□□□□ 0.56
VRK1-201ENST00000216639 NOMO3P69849 1222 aa18.56■□□□□ 0.56
VRK1-201ENST00000216639 PPP2R5EQ16537 467 aa18.56■□□□□ 0.56
VRK1-201ENST00000216639 CATSPER4Q7RTX7 472 aa18.56■□□□□ 0.56
VRK1-201ENST00000216639 PHF13Q86YI8 300 aaPredicted RBP18.56■□□□□ 0.56
VRK1-201ENST00000216639 RNPC3Q96LT9 517 aaKnown RBP18.56■□□□□ 0.56
VRK1-201ENST00000216639 ADAM22Q9P0K1 906 aa18.56■□□□□ 0.56
VRK1-201ENST00000216639 NXF1Q9UBU9 619 aaKnown RBP18.56■□□□□ 0.56
VRK1-201ENST00000216639 DMGDHQ9UI17 866 aaKnown RBP18.56■□□□□ 0.56
VRK1-201ENST00000216639 GINS2Q9Y248 185 aa18.56■□□□□ 0.56
VRK1-201ENST00000216639 GOLGA6L10A0A0M3HER8 536 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms